RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FAM118AQ9NWS6 357 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 HPF1Q9NWY4 346 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 KLRF1Q9NZS2 232 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 CNIH4Q9P003 139 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 A0A087WUU8 490 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 A0A1B0GWA3 101 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 ELOA3DA6NLF2 546 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 ZNF354AO60765 605 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 BCAS1O75363 584 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 OR6B1O95007 311 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 GASTP01350 101 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 GP1BBP13224 206 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 CBLP22681 906 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 CASRP41180 1078 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 RBM34P42696 430 aaKnown RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 SLC1A3P43003 542 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 TPD52P55327 224 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 SUMO3P55854 103 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 ESRRGP62508 458 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 ZNF117Q03924 483 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 Q0VFX4 171 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 NPRL3Q12980 569 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 SEC23BQ15437 767 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 CD226Q15762 336 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 NDUFAF6Q330K2 333 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 ELOA3BQ3SY89 546 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 SLC36A3Q495N2 470 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 CRTC2Q53ET0 693 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 FCRLBQ6BAA4 426 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 ZNF770Q6IQ21 691 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 KRT80Q6KB66 452 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 C1orf94Q6P1W5 598 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 TMEM81Q6P7N7 255 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 RTL4Q6ZR62 310 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 GALNT5Q7Z7M9 940 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 NKAIN4Q8IVV8 208 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 SIRT6Q8N6T7 355 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 AMER2Q8N7J2 671 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 ELOA3Q8NG57 546 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 TMEM239Q8WW34 195 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 FGF11Q92914 225 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 GTPBP3Q969Y2 492 aaKnown RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 SH3YL1Q96HL8 342 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 NODALQ96S42 347 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 FUZQ9BT04 418 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 DGCR6LQ9BY27 220 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 CPNE5Q9HCH3 593 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 PPP4R1LQ9P1A2 415 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 TMEFF2Q9UIK5 374 aaPredicted RBP9.42□□□□□ -0.9
USP3-219ENST00000561326 TMEM5Q9Y2B1 443 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 NTNG1Q9Y2I2 539 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 MED31Q9Y3C7 131 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 PCDHGB6Q9Y5F9 930 aa9.42□□□□□ -0.9
USP3-219ENST00000561326 CFAP54Q96N23 3096 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 A0A0B4J2E0 115 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 LOC100130705A0A1B0GUX0 176 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 A0A1B0GX12 115 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 ZNF891A8MT65 544 aaPredicted RBP9.41□□□□□ -0.9
USP3-219ENST00000561326 FAM47E-STBD1D6RA91 191 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 DLGAP1O14490 977 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 SLC16A6O15403 523 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 SNX4O95219 450 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 POU2F1P14859 743 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 CXCR1P25024 350 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 ITGA3P26006 1051 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 CASP3P42574 277 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 HTR3AP46098 478 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 CYB561P49447 251 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 HLCSP50747 726 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 ADARB1P78563 741 aaKnown RBP9.41□□□□□ -0.9
USP3-219ENST00000561326 PLAURQ03405 335 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 KCNAB2Q13303 367 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 IL18R1Q13478 541 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 PGBD2Q6P3X8 592 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 CBLN3Q6UW01 205 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 CD300LDQ6UXZ3 194 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 MBOAT2Q6ZWT7 520 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 VASH2Q86V25 355 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 TSPYL5Q86VY4 417 aaPredicted RBP9.41□□□□□ -0.9
USP3-219ENST00000561326 PARP8Q8N3A8 854 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 MARVELD2Q8N4S9 558 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 SETD9Q8NE22 299 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 OR10G3Q8NGC4 313 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 OR9Q2Q8NGE9 314 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 BRIX1Q8TDN6 353 aaKnown RBP9.41□□□□□ -0.9
USP3-219ENST00000561326 RNF138Q8WVD3 245 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 ARSGQ96EG1 525 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 DTNBP1Q96EV8 351 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 CNBD2Q96M20 576 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 NR1H4Q96RI1 486 aaPredicted RBP9.41□□□□□ -0.9
USP3-219ENST00000561326 APOL4Q9BPW4 351 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 ANKRD60Q9BZ19 345 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 RIBC2Q9H4K1 309 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 PTGES2Q9H7Z7 377 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 C12orf10Q9HB07 376 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 ICAM5Q9UMF0 924 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 POLHQ9Y253 713 aa9.41□□□□□ -0.9
USP3-219ENST00000561326 A0A087WUJ7 227 aa9.4□□□□□ -0.9
USP3-219ENST00000561326 ANKRD33BA6NCL7 494 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms