RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MRGBPQ9NV56 204 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 CLEC4AQ9UMR7 237 aa14.31□□□□□ -0.12
LMX1B-204ENST00000561065 NF1P21359 2839 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 A0A0J9YW62 118 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 GJE1A6NN92 205 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 TNFSF11O14788 317 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 EFNA2O43921 213 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 ATE1O95260 518 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 NID1P14543 1247 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 ADH6P28332 368 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 CD79BP40259 229 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 POLR2JP52435 117 aaKnown RBP14.3□□□□□ -0.12
LMX1B-204ENST00000561065 PHC1P78364 1004 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 FGFBP1Q14512 234 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 TOMM34Q15785 309 aaPredicted RBP14.3□□□□□ -0.12
LMX1B-204ENST00000561065 SGCBQ16585 318 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 KLHL26Q53HC5 615 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 SAXO2Q658L1 398 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 C22orf34Q6ZV56 151 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF614Q8N883 585 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 TOR1AIP2Q8NFQ8 470 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 CKAP2Q8WWK9 683 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 ARSGQ96EG1 525 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 OR51I1Q9H343 314 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 RAD21L1Q9H4I0 556 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 CACYBPQ9HB71 228 aaKnown RBP14.3□□□□□ -0.12
LMX1B-204ENST00000561065 TIGARQ9NQ88 270 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 KLHL28Q9NXS3 571 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 PRDM4Q9UKN5 801 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 ICAM5Q9UMF0 924 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 TRIM33Q9UPN9 1127 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 ACANP16112 2415 aa14.3□□□□□ -0.12
LMX1B-204ENST00000561065 FLNAP21333 2647 aaKnown RBP14.3□□□□□ -0.12
LMX1B-204ENST00000561065 PRR14LQ5THK1 2151 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 FAM234BA2RU67 622 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 DEFB108AA8MXU0 73 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 ADAMDEC1O15204 470 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 CXCL13O43927 109 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 GOSR1O95249 250 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 C1QCP02747 245 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 CD8BP10966 210 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 FCGR2AP12318 317 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 UGT2B10P36537 528 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 P2RX1P51575 399 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 RAC1P63000 192 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 GPR68Q15743 365 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 FBXW10Q5XX13 1052 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 GTF2IRD2BQ6EKJ0 949 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 PPP4R4Q6NUP7 873 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 EIF3MQ7L2H7 374 aaKnown RBP14.29□□□□□ -0.12
LMX1B-204ENST00000561065 FAM214BQ7L5A3 538 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF550Q7Z398 422 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 GTF2IRD2Q86UP8 949 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF610Q8N9Z0 462 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 OR2V1Q8NHB1 315 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 WFIKKN1Q96NZ8 548 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 PRRG4Q9BZD6 226 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 CALML5Q9NZT1 146 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 C6orf203Q9P0P8 240 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-204ENST00000561065 KCNE5Q9UJ90 142 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 CARD8Q9Y2G2 431 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 WDR45Q9Y484 360 aa14.29□□□□□ -0.12
LMX1B-204ENST00000561065 GPC6Q9Y625 555 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-204ENST00000561065 SETD2Q9BYW2 2564 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-204ENST00000561065 FREM1Q5H8C1 2179 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF264O43296 627 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 SS18L1O75177 396 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-204ENST00000561065 ZCCHC18P0CG32 403 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 OR12D1P0DN82 309 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 POU2F1P14859 743 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 DNASE1P24855 282 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 PCYT1AP49585 367 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 AQP5P55064 265 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 CASP9P55211 416 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 FUT5Q11128 374 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 CBFBQ13951 182 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 GPAT3Q53EU6 434 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 HEPHL1Q6MZM0 1159 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 LSRQ86X29 649 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-204ENST00000561065 STON2Q8WXE9 905 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 TMEM234Q8WY98 164 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 ROPN1LQ96C74 230 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 MBD6Q96DN6 1003 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 REXO5Q96IC2 774 aaKnown RBP14.28□□□□□ -0.12
LMX1B-204ENST00000561065 MARK4Q96L34 752 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 KLHL15Q96M94 604 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 OR52B2Q96RD2 323 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 SRXN1Q9BYN0 137 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 COQ10BQ9H8M1 238 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 MTHFD2LQ9H903 347 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-204ENST00000561065 SLC35A3Q9Y2D2 325 aa14.28□□□□□ -0.12
LMX1B-204ENST00000561065 UQCRHLA0A096LP55 91 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 SERINC4A6NH21 518 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 C9JVG2 144 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 ZNF195O14628 629 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 NTN1O95631 604 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 RAF1P04049 648 aa14.27□□□□□ -0.12
LMX1B-204ENST00000561065 PABPC4LP0CB38 370 aaKnown RBP14.27□□□□□ -0.12
LMX1B-204ENST00000561065 UBL4AP11441 157 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms