RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GABRG1Q8N1C3 465 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 CIARTQ8N365 385 aaPredicted RBP14.44□□□□□ -0.1
SNX1-213ENST00000561026 ATP6V1C2Q8NEY4 427 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 TOR1AIP2Q8NFQ8 470 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 STEAP2Q8NFT2 490 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 RFWD2Q8NHY2 731 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 ZFP90Q8TF47 636 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 IGFBPL1Q8WX77 278 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 PLPPR2Q96GM1 343 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 COX4I2Q96KJ9 171 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 PKNOX2Q96KN3 472 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 TMEM204Q9BSN7 226 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 GSX2Q9BZM3 304 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 SERHL2Q9H4I8 314 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 COQ10BQ9H8M1 238 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 AKTIPQ9H8T0 292 aa14.44□□□□□ -0.1
SNX1-213ENST00000561026 RAI1Q7Z5J4 1906 aaPredicted RBP14.43□□□□□ -0.1
SNX1-213ENST00000561026 SERINC4A6NH21 518 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 H7C1Q1 480 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 RNASET2O00584 256 aaKnown RBP14.43□□□□□ -0.1
SNX1-213ENST00000561026 FCMRO60667 390 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 DNAJA2O60884 412 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 STX11O75558 287 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 GCM2O75603 506 aaPredicted RBP14.43□□□□□ -0.1
SNX1-213ENST00000561026 AK1P00568 194 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 PLAUP00749 431 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 SERPINE1P05121 402 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 YES1P07947 543 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 ENPP1P22413 925 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 RAC3P60763 192 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 ZNF844Q08AG5 666 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 SELENBP1Q13228 472 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 CBFBQ13951 182 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 GPR68Q15743 365 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 ZNF141Q15928 474 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 PDCD2Q16342 344 aaPredicted RBP14.43□□□□□ -0.1
SNX1-213ENST00000561026 CLEC4FQ8N1N0 589 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 SLC43A2Q8N370 569 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 TMCO5AQ8N6Q1 288 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 ZNF781Q8N8C0 355 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 OR8J2Q8NGG1 315 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 S100PBPQ96BU1 408 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 BDH2Q9BUT1 245 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 KCNE5Q9UJ90 142 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 HEATR5AQ86XA9 2040 aa14.43□□□□□ -0.1
SNX1-213ENST00000561026 RNF103-CHMP3A0A140T963 221 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 WDR91A4D1P6 747 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 HS3ST1O14792 307 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 HEXAP06865 529 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 PAX1P15863 534 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 SLC7A1P30825 629 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 PTH2RP49190 550 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 CCR4P51679 360 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 ABCE1P61221 599 aaKnown RBP14.42□□□□□ -0.1
SNX1-213ENST00000561026 SKP2Q13309 424 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 CHI3L2Q15782 390 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 ARHGAP11BQ3KRB8 267 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 SFRP5Q5T4F7 317 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 ZNF611Q8N823 705 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 MIPOL1Q8TD10 442 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 PPP1R36Q96LQ0 422 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 THUMPD3Q9BV44 507 aaKnown RBP14.42□□□□□ -0.1
SNX1-213ENST00000561026 C20orf27Q9GZN8 174 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 LAT2Q9GZY6 243 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 MKLN1Q9UL63 735 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 PCDHGB4Q9UN71 923 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 TLN2Q9Y4G6 2542 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 USF3Q68DE3 2245 aa14.42□□□□□ -0.1
SNX1-213ENST00000561026 ZANQ9Y493 2812 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 FN1P02751 2386 aaKnown RBP14.41□□□□□ -0.1
SNX1-213ENST00000561026 CSPG4Q6UVK1 2322 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 CENPVL1A0A0U1RR11 272 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 A0A1W2PNR3 127 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 BIRC5O15392 142 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 SCN2BO60939 215 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 UGT2B17O75795 530 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 LY6G6DO95868 133 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 MYZAPP0CAP1 466 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 P2RY6Q15077 328 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 TSC22D1Q15714 1073 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 KRT71Q3SY84 523 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 TIGD2Q4W5G0 525 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 HEPHL1Q6MZM0 1159 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 ALKBH2Q6NS38 261 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 MREGQ8N565 214 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 OR4A15Q8NGL6 344 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 TMEM171Q8WVE6 324 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 ARL8AQ96BM9 186 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 SLC35G5Q96KT7 338 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 TACO1Q9BSH4 297 aaKnown RBP14.41□□□□□ -0.1
SNX1-213ENST00000561026 DPY30Q9C005 99 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 ZNF350Q9GZX5 532 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 BCO1Q9HAY6 547 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 ZNF701Q9NV72 531 aaPredicted RBP14.41□□□□□ -0.1
SNX1-213ENST00000561026 EXD2Q9NVH0 621 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 KLHL9Q9P2J3 617 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 ING1Q9UK53 422 aaPredicted RBP14.41□□□□□ -0.1
SNX1-213ENST00000561026 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.41□□□□□ -0.1
SNX1-213ENST00000561026 RAP2CQ9Y3L5 183 aa14.41□□□□□ -0.1
SNX1-213ENST00000561026 FREM1Q5H8C1 2179 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms