RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 OR52N1Q8NH53 320 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 GANCQ8TET4 914 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 APOBEC4Q8WW27 367 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 DDOQ99489 341 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 XKR8Q9H6D3 395 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 POLMQ9NP87 494 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 RHCGQ9UBD6 479 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 RPS6KB2Q9UBS0 482 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 ADAM29Q9UKF5 820 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 TMEM5Q9Y2B1 443 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC17A4Q9Y2C5 497 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 PLEKHM1Q9Y4G2 1056 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 IGKV1-8A0A0C4DH67 115 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 A0A1W2PQU0 124 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 EIF4EP06730 217 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 FCER2P06734 321 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 LAMP2P13473 410 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 CPN1P15169 458 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 NFYAP23511 347 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 RORAP35398 523 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 IGFALSP35858 605 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 FRKP42685 505 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC1A3P43003 542 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 MTNR1AP48039 350 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 MEOX2P50222 304 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 RAB28P51157 221 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 MMP15P51511 669 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 AKR1D1P51857 326 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 MANFP55145 182 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 PCBP4P57723 403 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 PRDX1Q06830 199 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 HYAL1Q12794 435 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SPDYE7PQ495Y7 208 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC27A4Q6P1M0 643 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 C17orf107Q6ZR85 190 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 KLHL36Q8N4N3 616 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 FAM131CQ96AQ9 280 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 ZNF764Q96H86 408 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC38A3Q99624 504 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 TMED9Q9BVK6 235 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 TRMT61BQ9BVS5 477 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 DNTTIP1Q9H147 329 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SEC14L3Q9UDX4 400 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 CDH23Q9H251 3354 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 A0A1B0GUH1 482 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 FAM227AF5H4B4 570 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 PLRG1O43660 514 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 CLEC3AO75596 197 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 UBL3O95164 117 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 PLATP00750 562 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 TFP02787 698 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 IGFBP1P08833 259 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 PPP3CBP16298 524 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 CXCL2P19875 107 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 RPL35P42766 123 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SELENOPP49908 381 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 LIM2P55344 173 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 CDK5Q00535 292 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 FAM69AQ5T7M9 428 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 REEP3Q6NUK4 255 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SIAH3Q8IW03 269 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 CDH26Q8IXH8 852 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 HORMAD2Q8N7B1 307 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 OR2A1Q8NGT9 310 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 OR2L8Q8NGY9 312 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 OR14C36Q8NHC7 312 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 FUZQ9BT04 418 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 IFT27Q9BW83 186 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC17A9Q9BYT1 436 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 DDX31Q9H8H2 851 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 TBC1D17Q9HA65 648 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 A4GALTQ9NPC4 353 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 SIRT3Q9NTG7 399 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 C5AR2Q9P296 337 aa12.98□□□□□ -0.33
RABGGTA-220ENST00000560998 REV3LO60673 3130 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 KDM4EB2RXH2 506 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 RFXAPO00287 272 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 RNGTTO60942 597 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 SNAPINO95295 136 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 ALDOBP05062 364 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 GSTM3P21266 225 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 DGKEP52429 567 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 RPS26P62854 115 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 GK2Q14410 553 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 GINS1Q14691 196 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 OR4C11Q6IEV9 310 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 ADCK2Q7Z695 626 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 MRGPREQ86SM8 312 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 TPRA1Q86W33 373 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 ZNF687Q8N1G0 1237 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 SAMD12Q8N8I0 201 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 AMER3Q8N944 861 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 ZNF454Q8N9F8 522 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 POGLUT1Q8NBL1 392 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 COQ8AQ8NI60 647 aa12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 MRPS24Q96EL2 167 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-220ENST00000560998 MS4A3Q96HJ5 214 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms