RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GPR119Q8TDV5 335 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 HTRA1Q92743 480 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 ARL8AQ96BM9 186 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 MSI2Q96DH6 328 aaKnown RBP16.32■□□□□ 0.2
TPM1-226ENST00000560959 BTBD2Q9BX70 525 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 KCNF1Q9H3M0 494 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 ACSS1Q9NUB1 689 aaPredicted RBP16.32■□□□□ 0.2
TPM1-226ENST00000560959 PLCE1Q9P212 2302 aa16.32■□□□□ 0.2
TPM1-226ENST00000560959 POLR3HQ9Y535 204 aaPredicted RBP16.32■□□□□ 0.2
TPM1-226ENST00000560959 TRIM49D1C9J1S8 452 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 H3BNH8 94 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 H3BQF6 201 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 WIPF1O43516 503 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 NUDT14O95848 222 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 EDNRAP25101 427 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 PDLIM4P50479 330 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 OR7E24Q6IFN5 339 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 CBLN3Q6UW01 205 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 COX18Q8N8Q8 333 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 MUS81Q96NY9 551 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 KCNA7Q96RP8 456 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 STACQ99469 402 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 DUSP22Q9NRW4 184 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 TMEM216Q9P0N5 145 aa16.31■□□□□ 0.2
TPM1-226ENST00000560959 MALRD1Q5VYJ5 2156 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 IGKV3D-15A0A087WSY6 115 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 IGHV3-15A0A0B4J1V0 119 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 SMAD9O15198 467 aaKnown RBP16.3■□□□□ 0.2
TPM1-226ENST00000560959 SNRPAP09012 282 aaKnown RBP16.3■□□□□ 0.2
TPM1-226ENST00000560959 APOBEC3AP31941 199 aaPredicted RBP16.3■□□□□ 0.2
TPM1-226ENST00000560959 NR4A2P43354 598 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 NAA20P61599 178 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 POU6F2P78424 691 aaPredicted RBP16.3■□□□□ 0.2
TPM1-226ENST00000560959 KIAA0040Q15053 153 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 UBAP2Q5T6F2 1119 aaKnown RBP16.3■□□□□ 0.2
TPM1-226ENST00000560959 B3GLCTQ6Y288 498 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 TIFABQ6ZNK6 161 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 DCAKDQ8WVC6 231 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 EGLN2Q96KS0 407 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 ZNF300Q96RE9 604 aaPredicted RBP16.3■□□□□ 0.2
TPM1-226ENST00000560959 PRR14Q9BWN1 585 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 TSPYL1Q9H0U9 437 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 CHODLQ9H9P2 273 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 FKRPQ9H9S5 495 aa16.3■□□□□ 0.2
TPM1-226ENST00000560959 MYOZ1Q9NP98 299 aaPredicted RBP16.3■□□□□ 0.2
TPM1-226ENST00000560959 RRAGDQ9NQL2 400 aaPredicted RBP16.3■□□□□ 0.2
TPM1-226ENST00000560959 CIB4A0PJX0 185 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 C9JVG2 144 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 NPIPB8E9PQR5 432 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 TCF21O43680 179 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 PRPH2P23942 346 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 ZNF83P51522 516 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 FOXA1P55317 472 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 SPOCK1Q08629 439 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 TOMM34Q15785 309 aaPredicted RBP16.29■□□□□ 0.2
TPM1-226ENST00000560959 LRIG3Q6UXM1 1119 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 IL17RELQ6ZVW7 336 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 MEX3DQ86XN8 651 aaKnown RBP16.29■□□□□ 0.2
TPM1-226ENST00000560959 ATP6V1C2Q8NEY4 427 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 OR52N5Q8NH56 324 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 CIDECQ96AQ7 238 aaPredicted RBP16.29■□□□□ 0.2
TPM1-226ENST00000560959 ZNF775Q96BV0 537 aaPredicted RBP16.29■□□□□ 0.2
TPM1-226ENST00000560959 C16orf58Q96GQ5 468 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 PIMREGQ9BSJ6 248 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 PIGUQ9H490 435 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 GSTO2Q9H4Y5 243 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 MID1IP1Q9NPA3 183 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 TAS2R16Q9NYV7 291 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 EMC3Q9P0I2 261 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 CARD8Q9Y2G2 431 aa16.29■□□□□ 0.2
TPM1-226ENST00000560959 A0A1W2PNR3 127 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 GTPBP1O00178 669 aaKnown RBP16.28■□□□□ 0.2
TPM1-226ENST00000560959 EIF4E2O60573 245 aaKnown RBP16.28■□□□□ 0.2
TPM1-226ENST00000560959 RAD51DO75771 328 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 APEHP13798 732 aaKnown RBP16.28■□□□□ 0.2
TPM1-226ENST00000560959 ATP6V1C1P21283 382 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 GGTLC2Q14390 218 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 SWI5Q1ZZU3 235 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 CCNJQ5T5M9 372 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 C3orf33Q6P1S2 294 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 ZNF540Q8NDQ6 660 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 OR5W2Q8NH69 310 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 FBXO30Q8TB52 745 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 REEP4Q9H6H4 257 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 EML4Q9HC35 981 aaKnown RBP16.28■□□□□ 0.2
TPM1-226ENST00000560959 ASB6Q9NWX5 421 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 CCL27Q9Y4X3 112 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 FKBP7Q9Y680 259 aa16.28■□□□□ 0.2
TPM1-226ENST00000560959 LOC390937A0A1W2PQ73 354 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 ESYT3A0FGR9 886 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 CCT8L1PA6NM43 557 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 OIP5O43482 229 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 TGFAP01135 160 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 ATP12AP54707 1039 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 CSNK2A1P68400 391 aaPredicted RBP16.27■□□□□ 0.2
TPM1-226ENST00000560959 CHRNEQ04844 493 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 PDE7AQ13946 482 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 MLC1Q15049 377 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 GABRA6Q16445 453 aa16.27■□□□□ 0.2
TPM1-226ENST00000560959 TMPPEQ6ZT21 453 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms