RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 A0A087WZY1 265 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 A0A1W2PRB8 838 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 TMEM114B3SHH9 223 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 KIAA0513O60268 411 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 CSF3P09919 207 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 NR4A2P43354 598 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 RAE1P78406 368 aaKnown RBP8.74□□□□□ -1.01
TPM1-225ENST00000560679 C17orf67Q0P5P2 114 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 GGTLC2Q14390 218 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 SQLEQ14534 574 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 KRT72Q14CN4 511 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 RAB35Q15286 201 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 DECR1Q16698 335 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 CR1LQ2VPA4 569 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 TECRLQ5HYJ1 363 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 TMEM201Q5SNT2 666 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 LETMD1Q6P1Q0 360 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 BHLHB9Q6PI77 547 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 Q6ZSR9 355 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 ZCCHC23Q6ZST2 131 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 Q6ZT83 130 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 C10orf107Q8IVU9 208 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 FAM9CQ8IZT9 166 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 PIAS4Q8N2W9 510 aaPredicted RBP8.74□□□□□ -1.01
TPM1-225ENST00000560679 MUC15Q8N387 334 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 PTGR2Q8N8N7 351 aaPredicted RBP8.74□□□□□ -1.01
TPM1-225ENST00000560679 OR4F6Q8NGB9 312 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 OSTF1Q92882 214 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 ZBTB8AQ96BR9 441 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 RAB3IPQ96QF0 476 aaPredicted RBP8.74□□□□□ -1.01
TPM1-225ENST00000560679 DHRS9Q9BPW9 319 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 TBL1XR1Q9BZK7 514 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 ELOVL6Q9H5J4 265 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 MED17Q9NVC6 651 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 TAS2R9Q9NYW1 312 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 STOML1Q9UBI4 398 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 TRIM33Q9UPN9 1127 aa8.74□□□□□ -1.01
TPM1-225ENST00000560679 TNPO3Q9Y5L0 923 aaKnown RBP8.74□□□□□ -1.01
TPM1-225ENST00000560679 GXYLT2A0PJZ3 443 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 CCDC189A1A4V9 331 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 G3V2L1 256 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 UPK1AO00322 258 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 PPP6CO00743 305 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 COQ9O75208 318 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 T-ENOLP0DO92 83 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 SFTPDP35247 375 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 OR3A2P47893 321 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 RFX3P48380 749 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 SLC1A6P48664 564 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 RASSF2P50749 326 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 EFNA4P52798 201 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 PRKAA2P54646 552 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 CARD18P57730 90 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 ABCE1P61221 599 aaKnown RBP8.73□□□□□ -1.01
TPM1-225ENST00000560679 ACAP2Q15057 778 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 RNPS1Q15287 305 aaKnown RBP8.73□□□□□ -1.01
TPM1-225ENST00000560679 FAM83EQ2M2I3 478 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 TSNAXIP1Q2TAA8 658 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 TCHHL1Q5QJ38 904 aaPredicted RBP8.73□□□□□ -1.01
TPM1-225ENST00000560679 TIMM23BQ5SRD1 257 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 TMEM107Q6UX40 140 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 ZYG11AQ6WRX3 759 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 FCRLAQ7L513 359 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 PLD6Q8N2A8 252 aaKnown RBP8.73□□□□□ -1.01
TPM1-225ENST00000560679 GATSQ8NAP1 163 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 SEMA6DQ8NFY4 1073 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 OR6Y1Q8NGX8 325 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 ATP6V1E2Q96A05 226 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 PHF21BQ96EK2 531 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 TMEM237Q96Q45 408 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
TPM1-225ENST00000560679 LMF2Q9BU23 707 aaKnown RBP8.73□□□□□ -1.01
TPM1-225ENST00000560679 CXorf36Q9H7Y0 433 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 COQ10BQ9H8M1 238 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 BRF2Q9HAW0 419 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 GP6Q9HCN6 339 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 Q9N2J8 555 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 SLC35C2Q9NQQ7 365 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 MCM8Q9UJA3 840 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 ZNF225Q9UK10 706 aa8.73□□□□□ -1.01
TPM1-225ENST00000560679 C19orf53Q9UNZ5 99 aaPredicted RBP8.73□□□□□ -1.01
TPM1-225ENST00000560679 A0A087WV62 115 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 OR5H1A6NKK0 313 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 ALG1L2C9J202 215 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 ITM2AO43736 263 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 EFNA2O43921 213 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 PCDH7O60245 1069 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 MGRN1O60291 552 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 CCDC22O60826 627 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 TRIM13O60858 407 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 LYPLA1O75608 230 aaPredicted RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 VENTXO95231 258 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 ESRRBO95718 433 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 OXSR1O95747 527 aaPredicted RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 JUNP05412 331 aaKnown RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 YES1P07947 543 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 RPS17P08708 135 aaKnown RBP8.72□□□□□ -1.01
TPM1-225ENST00000560679 KRT16P08779 473 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 LINGO3P0C6S8 592 aa8.72□□□□□ -1.01
TPM1-225ENST00000560679 APEHP13798 732 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms