RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CSNK2A1P68400 391 aaPredicted RBP12.6□□□□□ -0.39
TPM1-223ENST00000560445 ZNF141Q15928 474 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 SLC25A53Q5H9E4 307 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 ATG16L1Q676U5 607 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 OR4F3Q6IEY1 312 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 P3H2Q8IVL5 708 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 FBXO27Q8NI29 283 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 ZFP90Q8TF47 636 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 PMM1Q92871 262 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 PIK3IP1Q96FE7 263 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 ZNF350Q9GZX5 532 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 LAT2Q9GZY6 243 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 FBXO34Q9NWN3 711 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 KLHL13Q9P2N7 655 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 LIPT1Q9Y234 373 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 WDR45Q9Y484 360 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 NUP214P35658 2090 aaPredicted RBP12.6□□□□□ -0.39
TPM1-223ENST00000560445 HRNRQ86YZ3 2850 aaPredicted RBP12.59□□□□□ -0.39
TPM1-223ENST00000560445 PCNX3Q9H6A9 2034 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 ETV2O00321 342 aaPredicted RBP12.59□□□□□ -0.39
TPM1-223ENST00000560445 ITM2AO43736 263 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 FESP07332 822 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 CD53P19397 219 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 PSMB1P20618 241 aaKnown RBP12.59□□□□□ -0.39
TPM1-223ENST00000560445 RAC3P60763 192 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 P2RY6Q15077 328 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 QPRTQ15274 297 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 GPR68Q15743 365 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 PDZK1Q5T2W1 519 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 FCRLAQ7L513 359 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 CMIPQ8IY22 773 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 GLB1L3Q8NCI6 653 aaPredicted RBP12.59□□□□□ -0.39
TPM1-223ENST00000560445 OR5D16Q8NGK9 328 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 RFWD2Q8NHY2 731 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 GPR119Q8TDV5 335 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 CCL19Q99731 98 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 NUF2Q9BZD4 464 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 MEAF6Q9HAF1 191 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 CACYBPQ9HB71 228 aaKnown RBP12.59□□□□□ -0.39
TPM1-223ENST00000560445 THAP1Q9NVV9 213 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 EMC3Q9P0I2 261 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 C6orf203Q9P0P8 240 aaPredicted RBP12.59□□□□□ -0.39
TPM1-223ENST00000560445 MARCOQ9UEW3 520 aaPredicted RBP12.59□□□□□ -0.39
TPM1-223ENST00000560445 BTNL2Q9UIR0 455 aa12.59□□□□□ -0.39
TPM1-223ENST00000560445 DEFB108AA8MXU0 73 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 DNPH1O43598 174 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 KIAA0513O60268 411 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 CPSF4O95639 269 aaKnown RBP12.58□□□□□ -0.4
TPM1-223ENST00000560445 YES1P07947 543 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 BGNP21810 368 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 IL32P24001 234 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 CCKARP32238 428 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 SLC18A1P54219 525 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 NKX6-1P78426 367 aaPredicted RBP12.58□□□□□ -0.4
TPM1-223ENST00000560445 ACKR1Q16570 336 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 TMEM176BQ3YBM2 270 aaPredicted RBP12.58□□□□□ -0.4
TPM1-223ENST00000560445 TNFAIP8L3Q5GJ75 292 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 HEPHL1Q6MZM0 1159 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 CBLN3Q6UW01 205 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 BIVMQ86UB2 503 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 CLECL1Q8IZS7 167 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 POC1BQ8TC44 478 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 NEURL3Q96EH8 262 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 ZC3HAV1LQ96H79 300 aaKnown RBP12.58□□□□□ -0.4
TPM1-223ENST00000560445 PPP1R36Q96LQ0 422 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 ACTR6Q9GZN1 396 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 OR51I1Q9H343 314 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 UBTD1Q9HAC8 227 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.58□□□□□ -0.4
TPM1-223ENST00000560445 CLEC4AQ9UMR7 237 aa12.58□□□□□ -0.4
TPM1-223ENST00000560445 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 FLNAP21333 2647 aaKnown RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 NPIPA5A0A0B4J1W7 369 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 NPIPA7E9PJI5 369 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 HDAC3O15379 428 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 CYP7B1O75881 506 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 CNOT4O95628 575 aaKnown RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 NTN1O95631 604 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 NPIPA8P0DM63 369 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 IDO1P14902 403 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 ENPP1P22413 925 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 APOBEC1P41238 236 aaKnown RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 HTR3AP46098 478 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 CLK1P49759 484 aaKnown RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 MAP2K6P52564 334 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 RPS26P62854 115 aaKnown RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 ADAM8P78325 824 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 FOXD4Q12950 439 aaPredicted RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 SKP2Q13309 424 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 CASP8Q14790 479 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 FAM174BQ3ZCQ3 159 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.57□□□□□ -0.4
TPM1-223ENST00000560445 SAXO2Q658L1 398 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 PRSS57Q6UWY2 283 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 STAC2Q6ZMT1 411 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 ZNF550Q7Z398 422 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 ZNF619Q8N2I2 560 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 ANKRD42Q8N9B4 389 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 ZNF563Q8TA94 476 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms