RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TRAF6Q9Y4K3 522 aa14.58□□□□□ -0.08
HERC1-207ENST00000560316 POLR3HQ9Y535 204 aaPredicted RBP14.58□□□□□ -0.08
HERC1-207ENST00000560316 MGAM2Q2M2H8 2515 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 A0A1W2PQD3 144 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 CCT8L1PA6NM43 557 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 ZNF724A8MTY0 619 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 NDUFS8O00217 210 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 SRP14P37108 136 aaKnown RBP14.57□□□□□ -0.08
HERC1-207ENST00000560316 CAV1Q03135 178 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 ZNF678Q5SXM1 525 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 GALNT5Q7Z7M9 940 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 NUP43Q8NFH3 380 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 CIDECQ96AQ7 238 aaPredicted RBP14.57□□□□□ -0.08
HERC1-207ENST00000560316 C16orf58Q96GQ5 468 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 TMEM237Q96Q45 408 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 TRMOQ9BU70 441 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 ANKZF1Q9H8Y5 726 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 CARD8Q9Y2G2 431 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 GPC6Q9Y625 555 aaPredicted RBP14.57□□□□□ -0.08
HERC1-207ENST00000560316 FKBP7Q9Y680 259 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 ARFGEF3Q5TH69 2177 aa14.57□□□□□ -0.08
HERC1-207ENST00000560316 LRP5LA4QPB2 252 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 KIF2AO00139 706 aaPredicted RBP14.56□□□□□ -0.08
HERC1-207ENST00000560316 IFI6P09912 130 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 ZNF23P17027 643 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 PRKCAP17252 672 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 APOBEC3AP31941 199 aaPredicted RBP14.56□□□□□ -0.08
HERC1-207ENST00000560316 FOXG1P55316 489 aaPredicted RBP14.56□□□□□ -0.08
HERC1-207ENST00000560316 MST1LQ2TV78 715 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 NDUFAF6Q330K2 333 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 FBXW9Q5XUX1 488 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 ANKRD26P1Q6NSI1 321 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 CEP70Q8NHQ1 597 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 GPR119Q8TDV5 335 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 FBXO17Q96EF6 278 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 NAPGQ99747 312 aaPredicted RBP14.56□□□□□ -0.08
HERC1-207ENST00000560316 GIN1Q9NXP7 522 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 ICAM5Q9UMF0 924 aa14.56□□□□□ -0.08
HERC1-207ENST00000560316 UTP11Q9Y3A2 253 aaKnown RBP14.56□□□□□ -0.08
HERC1-207ENST00000560316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
HERC1-207ENST00000560316 HEATR1Q9H583 2144 aaKnown RBP14.56□□□□□ -0.08
HERC1-207ENST00000560316 NPIPA5A0A0B4J1W7 369 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 NPIPA7E9PJI5 369 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 PDPK1O15530 556 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 NPIPA8P0DM63 369 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 LCN1P31025 176 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 P2RX1P51575 399 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 GNG11P61952 73 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 C2orf54Q08AI8 447 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 SELENBP1Q13228 472 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 SWI5Q1ZZU3 235 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 LRIG3Q6UXM1 1119 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 COX18Q8N8Q8 333 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 ANKS4BQ8N8V4 417 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 EGLN2Q96KS0 407 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 MS4A4EQ96PG1 132 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 OR5B2Q96R09 309 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 BPESC1Q9GZL8 116 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 ACSS3Q9H6R3 686 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 TMEFF2Q9UIK5 374 aaPredicted RBP14.55□□□□□ -0.08
HERC1-207ENST00000560316 ACTL7BQ9Y614 415 aa14.55□□□□□ -0.08
HERC1-207ENST00000560316 LOC390937A0A1W2PQ73 354 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 ATP6V1G2-DDX39BF2Z307 99 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 VENTXO95231 258 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 H6PDO95479 791 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 ENO1P06733 434 aaKnown RBP14.54□□□□□ -0.08
HERC1-207ENST00000560316 ALOX5P09917 674 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 SERPINB4P48594 390 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 FOXA1P55317 472 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 PHC1P78364 1004 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 GABRA6Q16445 453 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 MTERF4Q7Z6M4 381 aaKnown RBP14.54□□□□□ -0.08
HERC1-207ENST00000560316 WDR31Q8NA23 367 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 SPATA4Q8NEY3 305 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 RFWD2Q8NHY2 731 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 JADE3Q92613 823 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 MRGPRX4Q96LA9 322 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 FKRPQ9H9S5 495 aa14.54□□□□□ -0.08
HERC1-207ENST00000560316 SERTM1A2A2V5 107 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 INHBAP08476 426 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 IL2RGP31785 369 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 NTF4P34130 210 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 SUMO3P55854 103 aaPredicted RBP14.53□□□□□ -0.08
HERC1-207ENST00000560316 POU6F2P78424 691 aaPredicted RBP14.53□□□□□ -0.08
HERC1-207ENST00000560316 MLC1Q15049 377 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 IMPG1Q17R60 797 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 KLHL26Q53HC5 615 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 ZNF385BQ569K4 471 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.53□□□□□ -0.08
HERC1-207ENST00000560316 C9orf135Q5VTT2 229 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 NOXRED1Q6NXP6 359 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 IKBIPQ70UQ0 350 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 CDS1Q92903 461 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 APH1AQ96BI3 265 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 MUS81Q96NY9 551 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 VRK1Q99986 396 aaPredicted RBP14.53□□□□□ -0.08
HERC1-207ENST00000560316 BHLHE41Q9C0J9 482 aaPredicted RBP14.53□□□□□ -0.08
HERC1-207ENST00000560316 OCEL1Q9H607 264 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 ASB6Q9NWX5 421 aa14.53□□□□□ -0.08
HERC1-207ENST00000560316 TAS2R16Q9NYV7 291 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms