RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 ZNF605Q86T29 641 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 FIG4Q92562 907 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 SFXN2Q96NB2 322 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 PINK1Q9BXM7 581 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 C1orf21Q9H246 121 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 EXO5Q9H790 373 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 ZNF835Q9Y2P0 537 aa19.71■□□□□ 0.75
SNX1-210ENST00000560260 C7orf72A4D263 438 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 ETV2O00321 342 aaPredicted RBP19.7■□□□□ 0.74
SNX1-210ENST00000560260 NTN1O95631 604 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 PLA2G2AP14555 144 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 BMP7P18075 431 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 IL11P20809 199 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 HTR1EP28566 365 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 ZNF136P52737 540 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 HOXC5Q00444 222 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 C3AR1Q16581 482 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 NHSL2Q5HYW2 709 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 GTPBP8Q8N3Z3 284 aaPredicted RBP19.7■□□□□ 0.74
SNX1-210ENST00000560260 OR4D11Q8NGI4 311 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 RNF145Q96MT1 663 aa19.7■□□□□ 0.74
SNX1-210ENST00000560260 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.7■□□□□ 0.74
SNX1-210ENST00000560260 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 NPIPA2E9PIF3 369 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 NPIPA3F8WFD2 350 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 M0R3H8 397 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 PDE5AO76074 875 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 PGCP20142 388 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 PTGS2P35354 604 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 SLC6A8P48029 635 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 STARP49675 285 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 GLYR1Q49A26 553 aaPredicted RBP19.69■□□□□ 0.74
SNX1-210ENST00000560260 CYBRD1Q53TN4 286 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 SLC25A53Q5H9E4 307 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 VASNQ6EMK4 673 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 LACC1Q8IV20 430 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 ZBTB8AQ96BR9 441 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 DTNBP1Q96EV8 351 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 CLPTM1LQ96KA5 538 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 ARHGDIGQ99819 225 aa19.69■□□□□ 0.74
SNX1-210ENST00000560260 CFAP73A6NFT4 308 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 FAM47E-STBD1D6RA91 191 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 SYT5O00445 386 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 GSTA4O15217 222 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 EFNA2O43921 213 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 LGI1O95970 557 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 ZNF17P17021 662 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 TNFRSF1BP20333 461 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 DLX5P56178 289 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 SESN3P58005 492 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 NRF1Q16656 503 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 ZSWIM7Q19AV6 140 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 EMC4Q5J8M3 183 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 Q6ZPB1 254 aaPredicted RBP19.68■□□□□ 0.74
SNX1-210ENST00000560260 ZNF440Q8IYI8 595 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 OR10Q1Q8NGQ4 319 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 ABTB1Q969K4 478 aaPredicted RBP19.68■□□□□ 0.74
SNX1-210ENST00000560260 TIMP4Q99727 224 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 ACER3Q9NUN7 267 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 ZNF337Q9Y3M9 751 aa19.68■□□□□ 0.74
SNX1-210ENST00000560260 FAAHO00519 579 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 TPST2O60704 377 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 SLC19A2O60779 497 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 FESP07332 822 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 CHMP24386 653 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 HTR2AP28223 471 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 IDH2P48735 452 aaKnown RBP19.67■□□□□ 0.74
SNX1-210ENST00000560260 LHX2P50458 406 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 NPTX1Q15818 432 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 ZNF550Q7Z398 422 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 CD163Q86VB7 1156 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 ATCAYQ86WG3 371 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 RBM45Q8IUH3 476 aaKnown RBP19.67■□□□□ 0.74
SNX1-210ENST00000560260 OR5M9Q8NGP3 310 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 FAM57AQ8TBR7 257 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 SLC26A7Q8TE54 656 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 ST8SIA1Q92185 356 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 SLC35B4Q969S0 331 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 PIGQQ9BRB3 760 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 PRR14Q9BWN1 585 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 PCDHAC1Q9H158 963 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 ARMC7Q9H6L4 198 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 PNPLA3Q9NST1 481 aa19.67■□□□□ 0.74
SNX1-210ENST00000560260 PRPF19Q9UMS4 504 aaKnown RBP19.67■□□□□ 0.74
SNX1-210ENST00000560260 POLEQ07864 2286 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 OR14I1A6ND48 311 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 ACTL6AO96019 429 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 ABOP16442 354 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 GTF3C1Q12789 2109 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 ELOAQ14241 798 aaKnown RBP19.66■□□□□ 0.74
SNX1-210ENST00000560260 GLYATQ6IB77 296 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 PLEKHM3Q6ZWE6 761 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 BHLHE22Q8NFJ8 381 aaPredicted RBP19.66■□□□□ 0.74
SNX1-210ENST00000560260 ZNF563Q8TA94 476 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 SARAFQ96BY9 339 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 WDYHV1Q96HA8 205 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 MRGPRX4Q96LA9 322 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 BTBD10Q9BSF8 475 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 TINAGQ9UJW2 476 aa19.66■□□□□ 0.74
SNX1-210ENST00000560260 OSGIN2Q9Y236 505 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms