RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 CCM2LQ9NUG4 571 aaPredicted RBP20.9■□□□□ 0.94
CRNDE-209ENST00000560208 VDAC3Q9Y277 283 aa20.9■□□□□ 0.94
CRNDE-209ENST00000560208 MSTNO14793 375 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 FCMRO60667 390 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 SMNDC1O75940 238 aaKnown RBP eCLIP20.89■□□□□ 0.93
CRNDE-209ENST00000560208 ETFAP13804 333 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 HPCAP84074 193 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 KLF10Q13118 480 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 HEPHL1Q6MZM0 1159 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 ROPN1LQ96C74 230 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 STARD4Q96DR4 205 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 NMUR2Q9GZQ4 415 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.89■□□□□ 0.93
CRNDE-209ENST00000560208 MKLN1Q9UL63 735 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 EDARQ9UNE0 448 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 ZNF175Q9Y473 711 aa20.89■□□□□ 0.93
CRNDE-209ENST00000560208 CLIC1O00299 241 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 STX11O75558 287 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 ATP12AP54707 1039 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 RPS3AP61247 264 aaKnown RBP20.88■□□□□ 0.93
CRNDE-209ENST00000560208 FUT5Q11128 374 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 LRIF1Q5T3J3 769 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 VWA1Q6PCB0 445 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 MSRB3Q8IXL7 192 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 ANKFN1Q8N957 763 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 ZNF527Q8NB42 609 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 FNDC9Q8TBE3 224 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 ZNF845Q96IR2 970 aaPredicted RBP20.88■□□□□ 0.93
CRNDE-209ENST00000560208 DACH2Q96NX9 599 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 HOXD1Q9GZZ0 328 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 SLC25A37Q9NYZ2 338 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 ARMCX1Q9P291 453 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 STOML1Q9UBI4 398 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 WDR45Q9Y484 360 aa20.88■□□□□ 0.93
CRNDE-209ENST00000560208 A0A087WZY1 265 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 PRAMEF27A3QJZ7 478 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 SH3D21A4FU49 640 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 HOXB9P17482 250 aaPredicted RBP20.87■□□□□ 0.93
CRNDE-209ENST00000560208 CPOXP36551 454 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 KIR2DL2P43627 348 aaPredicted RBP20.87■□□□□ 0.93
CRNDE-209ENST00000560208 MVDP53602 400 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 DSTNP60981 165 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 PON3Q15166 354 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 CD226Q15762 336 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 SYPL1Q16563 259 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 BTLAQ7Z6A9 289 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 HMGN2P46Q86SG4 172 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 DHDDSQ86SQ9 333 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 MISPQ8IVT2 679 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 METTL25Q8N6Q8 603 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 PHOSPHO1Q8TCT1 267 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 SH3YL1Q96HL8 342 aaPredicted RBP20.87■□□□□ 0.93
CRNDE-209ENST00000560208 FOXC2Q99958 501 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 ZNF350Q9GZX5 532 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 RNF122Q9H9V4 155 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 VAPAQ9P0L0 249 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 PLEKHA6Q9Y2H5 1048 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 CAPN7Q9Y6W3 813 aa20.87■□□□□ 0.93
CRNDE-209ENST00000560208 MTORP42345 2549 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 SETD2Q9BYW2 2564 aaPredicted RBP20.86■□□□□ 0.93
CRNDE-209ENST00000560208 A0A1W2PQD3 144 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 GOSR1O95249 250 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 H6PDO95479 791 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 NR2F1P10589 423 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 ZNF17P17021 662 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 DNASE1P24855 282 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 SIRPAP78324 504 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 TXNL4AP83876 142 aaKnown RBP20.86■□□□□ 0.93
CRNDE-209ENST00000560208 NFYCQ13952 458 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 SGCBQ16585 318 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 PDZK1Q5T2W1 519 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 GGNQ86UU5 652 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 RETREG3Q86VR2 466 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 GTPBP8Q8N3Z3 284 aaPredicted RBP20.86■□□□□ 0.93
CRNDE-209ENST00000560208 RAD21L1Q9H4I0 556 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 MRGBPQ9NV56 204 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 MED17Q9NVC6 651 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 NDRG3Q9UGV2 375 aa20.86■□□□□ 0.93
CRNDE-209ENST00000560208 C2CD3Q4AC94 2353 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 CENPVL1A0A0U1RR11 272 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 LOC100653049A0A140TA62 436 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 EIF1AYO14602 144 aaKnown RBP20.85■□□□□ 0.93
CRNDE-209ENST00000560208 KRT34O76011 436 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 ZNF41P51814 821 aaPredicted RBP20.85■□□□□ 0.93
CRNDE-209ENST00000560208 CHRNEQ04844 493 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 FAM27E3Q08E93 113 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 RGNQ15493 299 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 PLPPR5Q32ZL2 321 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 MMEL1Q495T6 779 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 TYW3Q6IPR3 259 aaKnown RBP20.85■□□□□ 0.93
CRNDE-209ENST00000560208 FRRS1Q6ZNA5 592 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 SNX32Q86XE0 403 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 TSPEARQ8WU66 669 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 NPAS1Q99742 590 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 OPN3Q9H1Y3 402 aaPredicted RBP20.85■□□□□ 0.93
CRNDE-209ENST00000560208 P2RX2Q9UBL9 471 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 LIPT1Q9Y234 373 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 DTNAQ9Y4J8 743 aa20.85■□□□□ 0.93
CRNDE-209ENST00000560208 C7orf72A4D263 438 aa20.84■□□□□ 0.93
CRNDE-209ENST00000560208 NPIPB9F8W1W9 429 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms