RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 COPEO14579 308 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 EIF1AYO14602 144 aaKnown RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 ADAMDEC1O15204 470 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 GMFGO60234 142 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 SS18L1O75177 396 aaPredicted RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 GCM2O75603 506 aaPredicted RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 SLITRK5O94991 958 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 NKX2-2O95096 273 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 SNUPNO95149 360 aaKnown RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 UTS2O95399 124 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 ANGPTL1O95841 491 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 OPN1LWP04000 364 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 ENO1P06733 434 aaKnown RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 ACP2P11117 423 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 NQO1P15559 274 aaKnown RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 RAB6AP20340 208 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 FPR1P21462 350 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 TBXA2RP21731 343 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 ATP5F1P24539 256 aaPredicted RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 SHC1P29353 583 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 MPIP34949 423 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 ETV4P43268 484 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 NCBP2P52298 156 aaKnown RBP eCLIP5.17□□□□□ -1.58
USP3-215ENST00000559771 PKNOX1P55347 436 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 ZNF763Q0D2J5 394 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 C2orf80Q0P641 193 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 LCP2Q13094 533 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 GANABQ14697 944 aaKnown RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 KRT72Q14CN4 511 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 ZNF385BQ569K4 471 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 MFSD12Q6NUT3 480 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 ASRGL1Q7L266 308 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 ZNF551Q7Z340 670 aaPredicted RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 GALNT10Q86SR1 603 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 SAMD14Q8IZD0 417 aaPredicted RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 FITM2Q8N6M3 262 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 OR10D3Q8NH80 312 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 TCP10LQ8TDR4 215 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 CIDECQ96AQ7 238 aaPredicted RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 PAIP2Q9BPZ3 127 aaKnown RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 SLC39A3Q9BRY0 314 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 BDH2Q9BUT1 245 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 KLHL4Q9C0H6 718 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 LRMDAQ9H2I8 198 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 C12orf65Q9H3J6 166 aaKnown RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 MYNNQ9NPC7 610 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 NTMQ9P121 344 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 DCDC2Q9UHG0 476 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 GRID1Q9ULK0 1009 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 CLEC4AQ9UMR7 237 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 PROCRQ9UNN8 238 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 OR10H1Q9Y4A9 318 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 POLR3HQ9Y535 204 aaPredicted RBP5.17□□□□□ -1.58
USP3-215ENST00000559771 PTGDR2Q9Y5Y4 395 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 AP4B1Q9Y6B7 739 aa5.17□□□□□ -1.58
USP3-215ENST00000559771 COL6A5A8TX70 2615 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 ROS1P08922 2347 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 CSPG4Q6UVK1 2322 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 A0A1W2PPM1 405 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 A0A1W2PRB8 838 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 C7orf72A4D263 438 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 FAM171A2A8MVW0 826 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 ALG1L2C9J202 215 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 GOLGA8RI6L899 631 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 CXCL13O43927 109 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 CCDC22O60826 627 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 COQ9O75208 318 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 SPAG7O75391 227 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 UBOX5O94941 541 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 NTN1O95631 604 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 OXSR1O95747 527 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 NGFRP08138 427 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 IFI6P09912 130 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 LINGO3P0C6S8 592 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 DANCRP0C864 163 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 ZNF17P17021 662 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 VAMP1P23763 118 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 PRPH2P23942 346 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 EDNRAP25101 427 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 HMOX2P30519 316 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 GABRA3P34903 492 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 KRT20P35900 424 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 FRKP42685 505 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 GSTM5P46439 218 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 RFX3P48380 749 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 KCNJ5P48544 419 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 MNAT1P51948 309 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 NR1H2P55055 460 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 EEFSECP57772 596 aaKnown RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 NCALDP61601 193 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 ELF3P78545 371 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 MRPS22P82650 360 aaKnown RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 C17orf67Q0P5P2 114 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 TNK1Q13470 666 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 PDE7AQ13946 482 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 TSC22D1Q15714 1073 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 CD226Q15762 336 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 DECR1Q16698 335 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 EXOC3L2Q2M3D2 409 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 PLPPR5Q32ZL2 321 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms