RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CEACAM7Q14002 265 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 LRRC23Q53EV4 343 aaPredicted RBP19.62■□□□□ 0.73
SNX1-206ENST00000559389 SLC25A53Q5H9E4 307 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 DCST1Q5T197 706 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 ARHGAP24Q8N264 748 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 FAM156AQ8NDB6 213 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 POC1BQ8TC44 478 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 RASSF5Q8WWW0 418 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 ST8SIA1Q92185 356 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 SARAFQ96BY9 339 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 RNF145Q96MT1 663 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 PIGQQ9BRB3 760 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 UGT2B28Q9BY64 529 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 PCNX3Q9H6A9 2034 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 CFAP46Q8IYW2 2715 aa19.62■□□□□ 0.73
SNX1-206ENST00000559389 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 SHISA8B8ZZ34 492 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 BCKDKO14874 412 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 GSTA4O15217 222 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 FRS3O43559 492 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 SLC19A2O60779 497 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 IFNA14P01570 189 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 GKN3PP0CG01 181 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 PRG2P13727 222 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 ABOP16442 354 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 BMP7P18075 431 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 GNLYP22749 145 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 RYKP34925 604 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 EIF1P41567 113 aaKnown RBP19.61■□□□□ 0.73
SNX1-206ENST00000559389 ACAA2P42765 397 aaKnown RBP19.61■□□□□ 0.73
SNX1-206ENST00000559389 UQCRFS1P47985 274 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 DLX5P56178 289 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 ELOAQ14241 798 aaKnown RBP19.61■□□□□ 0.73
SNX1-206ENST00000559389 DUSP7Q16829 419 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 DNAL1Q4LDG9 190 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 VASNQ6EMK4 673 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 AAGABQ6PD74 315 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 Q6ZPB1 254 aaPredicted RBP19.61■□□□□ 0.73
SNX1-206ENST00000559389 OR5M1Q8NGP8 315 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 SLC26A7Q8TE54 656 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 MRGPRX4Q96LA9 322 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 EVA1AQ9H8M9 152 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 TNFRSF10DQ9UBN6 386 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 EGFL7Q9UHF1 273 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 SLC13A4Q9UKG4 626 aa19.61■□□□□ 0.73
SNX1-206ENST00000559389 HEATR5AQ86XA9 2040 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 NPIPA2E9PIF3 369 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 NPIPA3F8WFD2 350 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 LINC01387J3KSC0 135 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 WISP1O95388 367 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 C8BP07358 591 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 UQCRBP14927 111 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 NCK1P16333 377 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 TCN1P20061 433 aaPredicted RBP19.6■□□□□ 0.73
SNX1-206ENST00000559389 ELK4P28324 431 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 ADH6P28332 368 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 ZNF136P52737 540 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 CYBRD1Q53TN4 286 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 ZNF563Q8TA94 476 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 FAM57AQ8TBR7 257 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 TMEM234Q8WY98 164 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 ABTB1Q969K4 478 aaPredicted RBP19.6■□□□□ 0.73
SNX1-206ENST00000559389 ARHGDIGQ99819 225 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 ACER3Q9NUN7 267 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 KLHL28Q9NXS3 571 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 FREM3P0C091 2139 aa19.6■□□□□ 0.73
SNX1-206ENST00000559389 TMEM229AB2RXF0 380 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 LGI1O95970 557 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 RGS8P57771 180 aaPredicted RBP19.59■□□□□ 0.73
SNX1-206ENST00000559389 SESN3P58005 492 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 NRF1Q16656 503 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.59■□□□□ 0.73
SNX1-206ENST00000559389 TIMP4Q99727 224 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 PRDM14Q9GZV8 571 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.59■□□□□ 0.73
SNX1-206ENST00000559389 TESQ9UGI8 421 aaKnown RBP19.59■□□□□ 0.73
SNX1-206ENST00000559389 MAGEL2Q9UJ55 1249 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 BAG5Q9UL15 447 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 ZNF407Q9C0G0 2248 aa19.59■□□□□ 0.73
SNX1-206ENST00000559389 M0R3H8 397 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 GYG2O15488 501 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 ATP5HO75947 161 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 PDE5AO76074 875 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 TPOP07202 933 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 FESP07332 822 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 ZNF708P17019 499 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 IDH2P48735 452 aaKnown RBP19.58■□□□□ 0.72
SNX1-206ENST00000559389 LHX2P50458 406 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 BNIP2Q12982 314 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 WLSQ5T9L3 541 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 GLYATQ6IB77 296 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 ENPP6Q6UWR7 440 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 PLEKHM3Q6ZWE6 761 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 GRINAQ7Z429 371 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 CD163Q86VB7 1156 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 FAM162AQ96A26 154 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 WFDC6Q9BQY6 131 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 PNPLA3Q9NST1 481 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 PRDM4Q9UKN5 801 aa19.58■□□□□ 0.72
SNX1-206ENST00000559389 ZNF337Q9Y3M9 751 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms