RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ADAM19Q9H013 955 aa13.44□□□□□ -0.26
SNRPA1-207ENST00000559309 ARMC7Q9H6L4 198 aa13.44□□□□□ -0.26
SNRPA1-207ENST00000559309 ANAPC2Q9UJX6 822 aa13.44□□□□□ -0.26
SNRPA1-207ENST00000559309 RPS6KA6Q9UK32 745 aa13.44□□□□□ -0.26
SNRPA1-207ENST00000559309 CFAP73A6NFT4 308 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 AP3D1O14617 1153 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 SUV39H1O43463 412 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 PRKD3O94806 890 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 PRSS23O95084 383 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 LYPD3O95274 346 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 PRKCAP17252 672 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 HTR2AP28223 471 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 ADH6P28332 368 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 MAGEA5P43359 124 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 GFRA1P56159 465 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 CBFBQ13951 182 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 NHSL2Q5HYW2 709 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 ENPP6Q6UWR7 440 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 ARSKQ6UWY0 536 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 ZNF550Q7Z398 422 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 PIWIL3Q7Z3Z3 882 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 SLC22A16Q86VW1 577 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 RBM45Q8IUH3 476 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 SPPL2CQ8IUH8 684 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 FAM109AQ8N4B1 249 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 TEX19Q8NA77 164 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 ST8SIA1Q92185 356 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 FAM162AQ96A26 154 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 PYURFQ96I23 114 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 HSH2DQ96JZ2 352 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 NPAS1Q99742 590 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 MED17Q9NVC6 651 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 ADPRHL2Q9NX46 363 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 TESQ9UGI8 421 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 ACAD8Q9UKU7 415 aa13.43□□□□□ -0.26
SNRPA1-207ENST00000559309 FREM3P0C091 2139 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 B8ZZF3 427 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 GTPBP1O00178 669 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 FRS3O43559 492 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 THY1P04216 161 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 CELA3AP09093 270 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 GKN3PP0CG01 181 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 NQO1P15559 274 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 PGCP20142 388 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 RFC3P40938 356 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 MASP1P48740 699 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 PPIAP62937 165 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 KCNC4Q03721 635 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 FLOT2Q14254 428 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 CYP2R1Q6VVX0 501 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 ADGRG5Q8IZF4 528 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 GTPBP8Q8N3Z3 284 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 PAPD5Q8NDF8 572 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 FAM83FQ8NEG4 500 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 LZICQ8WZA0 190 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 ZBTB8AQ96BR9 441 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 SNRNP40Q96DI7 357 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 SH3YL1Q96HL8 342 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 AMBRA1Q9C0C7 1298 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 POLR2J2Q9GZM3 115 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 POLR2J3Q9H1A7 115 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 MAGIXQ9H6Y5 334 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 PTGES2Q9H7Z7 377 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 ACER3Q9NUN7 267 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 KLHL28Q9NXS3 571 aa13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 PRRC2CQ9Y520 2896 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-207ENST00000559309 SHANK1Q9Y566 2161 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 M0R3H8 397 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 RRP9O43818 475 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 EFNA2O43921 213 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 CRYABP02511 175 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 UMPSP11172 480 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 ZNF17P17021 662 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 ZNF24P17028 368 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 TNFRSF1BP20333 461 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 DPP4P27487 766 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 SLC1A3P43003 542 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 ACTR3P61158 418 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 VLDLRP98155 873 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 CCNIQ14094 377 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 IFI44LQ53G44 452 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 LINC00114Q6XXX2 140 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 CARM1Q86X55 608 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 OR4K17Q8NGC6 315 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 OR10Q1Q8NGQ4 319 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 SLC26A7Q8TE54 656 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 FAR1Q8WVX9 515 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 GEMIN6Q8WXD5 167 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 NR4A3Q92570 626 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 PROX1Q92786 737 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 MRGPRX4Q96LA9 322 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 ZNF426Q9BUY5 554 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 C12orf10Q9HB07 376 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 IL1RAPQ9NPH3 570 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 TAS2R10Q9NYW0 307 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 B4GALT7Q9UBV7 327 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 A4GNTQ9UNA3 340 aa13.41□□□□□ -0.26
SNRPA1-207ENST00000559309 A0A0B4J2E0 115 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms