RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PPP4R4Q6NUP7 873 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 TNFAIP8L2Q6P589 184 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-210ENST00000558879 FRRS1Q6ZNA5 592 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 OR5W2Q8NH69 310 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 ZFP90Q8TF47 636 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 PAIP2Q9BPZ3 127 aaKnown RBP15.2■□□□□ 0.02
LRRC28-210ENST00000558879 SLC39A3Q9BRY0 314 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 TMUB1Q9BVT8 246 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 LAT2Q9GZY6 243 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 SAP130Q9H0E3 1048 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 POLE3Q9NRF9 147 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 EXD2Q9NVH0 621 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 KLHL28Q9NXS3 571 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 MKLN1Q9UL63 735 aa15.2■□□□□ 0.02
LRRC28-210ENST00000558879 ACANP16112 2415 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 C16orf97H3BN30 126 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 GTPBP1O00178 669 aaKnown RBP15.19■□□□□ 0.02
LRRC28-210ENST00000558879 ZNF195O14628 629 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 HDAC3O15379 428 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 CPSF4O95639 269 aaKnown RBP15.19■□□□□ 0.02
LRRC28-210ENST00000558879 PLGP00747 810 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-210ENST00000558879 C1QCP02747 245 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 OR12D1P0DN82 309 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 LOXP28300 417 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-210ENST00000558879 KHKP50053 298 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 CASP9P55211 416 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 CTBP2P56545 445 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 UFM1P61960 85 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 QPRTQ15274 297 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 MAPK14Q16539 360 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 C3orf33Q6P1S2 294 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 C22orf34Q6ZV56 151 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 ZNF550Q7Z398 422 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 C16orf62Q7Z3J2 963 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 SPATA19Q7Z5L4 167 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 TGIF2LYQ8IUE0 185 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 TMCO5AQ8N6Q1 288 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 OSTF1Q92882 214 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 SLC35A5Q9BS91 424 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 MED18Q9BUE0 208 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 TMBIM4Q9HC24 238 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 ZNF226Q9NYT6 803 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 C6orf203Q9P0P8 240 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-210ENST00000558879 MARCOQ9UEW3 520 aaPredicted RBP15.19■□□□□ 0.02
LRRC28-210ENST00000558879 WDR45Q9Y484 360 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 GPR45Q9Y5Y3 372 aa15.19■□□□□ 0.02
LRRC28-210ENST00000558879 ROS1P08922 2347 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 MTORP42345 2549 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 PRAMEF27A3QJZ7 478 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 GJE1A6NN92 205 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 CASKO14936 926 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 CSTAP01040 98 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 PGRP06401 933 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 CD53P19397 219 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 EPHA3P29320 983 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 S100A3P33764 101 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 PGM1P36871 562 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 KCNJ5P48544 419 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 CCR4P51679 360 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 RIPPLY3P57055 190 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 CARD18P57730 90 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 MAGOHP61326 146 aaKnown RBP15.18■□□□□ 0.02
LRRC28-210ENST00000558879 DEFB113Q30KQ7 82 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 STAC2Q6ZMT1 411 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 MGARPQ8TDB4 240 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 ABHD3Q8WU67 409 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 ST8SIA1Q92185 356 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 RAB8BQ92930 207 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 ROPN1LQ96C74 230 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 WDR55Q9H6Y2 383 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-210ENST00000558879 GP6Q9HCN6 339 aa15.18■□□□□ 0.02
LRRC28-210ENST00000558879 MAP1AP78559 2803 aaPredicted RBP15.17■□□□□ 0.02
LRRC28-210ENST00000558879 GOLGA8QA0A0J9YX86 632 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 GOLGA8OA6NCC3 632 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 TRPC5OSA6NMA1 111 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 C9JVG2 144 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 GOLGA8NF8WBI6 632 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 HMGN4O00479 90 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 BCAS1O75363 584 aaPredicted RBP15.17■□□□□ 0.02
LRRC28-210ENST00000558879 ERLIN1O75477 346 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 H6PDO95479 791 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 CDKN2CP42773 168 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 NME5P56597 212 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 KEAP1Q14145 624 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 RNPS1Q15287 305 aaKnown RBP15.17■□□□□ 0.02
LRRC28-210ENST00000558879 ATAD3BQ5T9A4 648 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 ATG16L1Q676U5 607 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 MAVSQ7Z434 540 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 ZNF619Q8N2I2 560 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 RFWD2Q8NHY2 731 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 XAGE5Q8WWM1 108 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 ROBO4Q8WZ75 1007 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 THUMPD3Q9BV44 507 aaKnown RBP15.17■□□□□ 0.02
LRRC28-210ENST00000558879 TIGARQ9NQ88 270 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 KLHL13Q9P2N7 655 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 SLC35A3Q9Y2D2 325 aa15.17■□□□□ 0.02
LRRC28-210ENST00000558879 SLCO1B7G3V0H7 640 aa15.16■□□□□ 0.02
LRRC28-210ENST00000558879 KLF11O14901 512 aa15.16■□□□□ 0.02
LRRC28-210ENST00000558879 THBDP07204 575 aa15.16■□□□□ 0.02
LRRC28-210ENST00000558879 PABPC4LP0CB38 370 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms