RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ADAMDEC1O15204 470 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 SNUPNO95149 360 aaKnown RBP11.2□□□□□ -0.62
SMAD3-208ENST00000558827 CSTAP01040 98 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 CRHP06850 196 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 PRKCAP17252 672 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 CCNA2P20248 432 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 SORDQ00796 357 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 TESK1Q15569 626 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 SYPL1Q16563 259 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 GTDC1Q4AE62 458 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 ATAD3BQ5T9A4 648 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 TYW3Q6IPR3 259 aaKnown RBP11.2□□□□□ -0.62
SMAD3-208ENST00000558827 OGFOD2Q6N063 350 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 CHDHQ8NE62 594 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-208ENST00000558827 OR9I1Q8NGQ6 314 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 OR5W2Q8NH69 310 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 ABHD3Q8WU67 409 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 NEURL3Q96EH8 262 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 CCDC115Q96NT0 180 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 SLC6A13Q9NSD5 602 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 NDRG3Q9UGV2 375 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 BTNL2Q9UIR0 455 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 ST6GALNAC2Q9UJ37 374 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 WDR45Q9Y484 360 aa11.2□□□□□ -0.62
SMAD3-208ENST00000558827 C7orf72A4D263 438 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 HMGN4O00479 90 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 EIF4E2O60573 245 aaKnown RBP11.19□□□□□ -0.62
SMAD3-208ENST00000558827 SLC22A3O75751 556 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 H6PDO95479 791 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 HRGP04196 525 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 PGRP06401 933 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 ENPP1P22413 925 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 CCKARP32238 428 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 PEX19P40855 299 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 EIF1P41567 113 aaKnown RBP11.19□□□□□ -0.62
SMAD3-208ENST00000558827 KHKP50053 298 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 SESN3P58005 492 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 EEF1A1P68104 462 aaKnown RBP11.19□□□□□ -0.62
SMAD3-208ENST00000558827 MERTKQ12866 999 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 TSC22D1Q15714 1073 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 ZNF141Q15928 474 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 TIGD2Q4W5G0 525 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 TTMPQ5BVD1 217 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 PDSS1Q5T2R2 415 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 AGBL2Q5U5Z8 902 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 EEF1A1P5Q5VTE0 462 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 HEPHL1Q6MZM0 1159 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 FRRS1Q6ZNA5 592 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 ESPNLQ6ZVH7 1005 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 FAM214BQ7L5A3 538 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.19□□□□□ -0.62
SMAD3-208ENST00000558827 NUFIP2Q7Z417 695 aaKnown RBP11.19□□□□□ -0.62
SMAD3-208ENST00000558827 TOR1AIP2Q8NFQ8 470 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 CNOT9Q92600 299 aaKnown RBP11.19□□□□□ -0.62
SMAD3-208ENST00000558827 PIK3IP1Q96FE7 263 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 THOC1Q96FV9 657 aaKnown RBP11.19□□□□□ -0.62
SMAD3-208ENST00000558827 DACH2Q96NX9 599 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 SLC39A3Q9BRY0 314 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 MED18Q9BUE0 208 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 ZNF350Q9GZX5 532 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 LAT2Q9GZY6 243 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 SLCO1B3Q9NPD5 702 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 EMC9Q9Y3B6 208 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 GPC6Q9Y625 555 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-208ENST00000558827 ACANP16112 2415 aa11.19□□□□□ -0.62
SMAD3-208ENST00000558827 MTORP42345 2549 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 C16orf97H3BN30 126 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 UBDO15205 165 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 SIAH2O43255 324 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 KIAA0513O60268 411 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 AK1P00568 194 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 CHRM4P08173 479 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 TFPIP10646 304 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 FCGR2AP12318 317 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 DNASE1P24855 282 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 SLC7A1P30825 629 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 UGT2B10P36537 528 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 SKP2Q13309 424 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 CBFBQ13951 182 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 GUSBP1Q15486 140 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 EIF3MQ7L2H7 374 aaKnown RBP11.18□□□□□ -0.62
SMAD3-208ENST00000558827 TUSC5Q8IXB3 177 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 KIRREL3Q8IZU9 778 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 ZNF619Q8N2I2 560 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 ZNF563Q8TA94 476 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 MIPOL1Q8TD10 442 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 VPS33AQ96AX1 596 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 AURKBQ96GD4 344 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-208ENST00000558827 OR5B2Q96R09 309 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 NMUR2Q9GZQ4 415 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 COQ10BQ9H8M1 238 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 TESMINQ9Y4I5 508 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 USH1CQ9Y6N9 552 aa11.18□□□□□ -0.62
SMAD3-208ENST00000558827 SLCO1B7G3V0H7 640 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 RFXANKO14593 260 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 AP3D1O14617 1153 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 ADAM11O75078 769 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 SS18L1O75177 396 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-208ENST00000558827 SOX30O94993 753 aa11.17□□□□□ -0.62
SMAD3-208ENST00000558827 ANP32DO95626 131 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms