RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ETV2O00321 342 aaPredicted RBP13.56□□□□□ -0.24
VPS18-202ENST00000558474 CDC40O60508 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS18-202ENST00000558474 TRIM3O75382 744 aaPredicted RBP13.56□□□□□ -0.24
VPS18-202ENST00000558474 PNMTP11086 282 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 CD46P15529 392 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 ZNF23P17027 643 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 RBM34P42696 430 aaKnown RBP13.56□□□□□ -0.24
VPS18-202ENST00000558474 SLC1A3P43003 542 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 YAP1P46937 504 aaKnown RBP13.56□□□□□ -0.24
VPS18-202ENST00000558474 PTDSS1P48651 473 aaKnown RBP13.56□□□□□ -0.24
VPS18-202ENST00000558474 MAP2K6P52564 334 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 SESN3P58005 492 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 MICAQ29983 383 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 DCST1Q5T197 706 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 BORAQ6PGQ7 559 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 IGFL3Q6UXB1 125 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 GDF7Q7Z4P5 450 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 MDGA2Q7Z553 956 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 RNF113BQ8IZP6 322 aaKnown RBP13.56□□□□□ -0.24
VPS18-202ENST00000558474 ICA1LQ8NDH6 482 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 SLC38A4Q969I6 547 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 ALPK1Q96QP1 1244 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 FAM173AQ9BQD7 235 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 FUZQ9BT04 418 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 ADAM19Q9H013 955 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 GABARAPL1Q9H0R8 117 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 OAZ3Q9UMX2 235 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 KLF13Q9Y2Y9 288 aaPredicted RBP13.56□□□□□ -0.24
VPS18-202ENST00000558474 MRPS18CQ9Y3D5 142 aaKnown RBP13.56□□□□□ -0.24
VPS18-202ENST00000558474 MED13Q9UHV7 2174 aa13.56□□□□□ -0.24
VPS18-202ENST00000558474 A0A1B0GWA3 101 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 FAM47E-STBD1D6RA91 191 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 H0YJX3 145 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 OIP5O43482 229 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ADAM11O75078 769 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 SLC25A12O75746 678 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 CBR3O75828 277 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 HPRP00739 348 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 IGF2P01344 180 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ITGB2P05107 769 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 SP1P08047 785 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 GP1BBP13224 206 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ITPKBP27987 946 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 RYKP34925 604 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 IFNGR2P38484 337 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 VHLP40337 213 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 IDH2P48735 452 aaKnown RBP13.55□□□□□ -0.24
VPS18-202ENST00000558474 RNF144AP50876 292 aaPredicted RBP13.55□□□□□ -0.24
VPS18-202ENST00000558474 CCR4P51679 360 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ARG2P78540 354 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 HOXC5Q00444 222 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 NDUFAF6Q330K2 333 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 SLC25A53Q5H9E4 307 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ALG10BQ5I7T1 473 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 PRAMEF20Q5VT98 475 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 BICRALQ6AI39 1079 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 TIGD3Q6B0B8 471 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 SLC25A25Q6KCM7 469 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 PPP4R4Q6NUP7 873 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 LINC00114Q6XXX2 140 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 TSPYL5Q86VY4 417 aaPredicted RBP13.55□□□□□ -0.24
VPS18-202ENST00000558474 WDSUB1Q8N9V3 476 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 TMEM178AQ8NBL3 297 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 OR2M3Q8NG83 312 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 OR1J4Q8NGS1 313 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ZNF563Q8TA94 476 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ACOT11Q8WXI4 607 aaPredicted RBP13.55□□□□□ -0.24
VPS18-202ENST00000558474 DNAJC9Q8WXX5 260 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 SCMH1Q96GD3 660 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 SH3YL1Q96HL8 342 aaPredicted RBP13.55□□□□□ -0.24
VPS18-202ENST00000558474 ZNF597Q96LX8 424 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 SIGLEC12Q96PQ1 595 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 KLHL4Q9C0H6 718 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 KRCC1Q9NPI7 259 aaPredicted RBP13.55□□□□□ -0.24
VPS18-202ENST00000558474 MAN2C1Q9NTJ4 1040 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 ANKRD10Q9NXR5 420 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 VNN3Q9NY84 501 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 TAS2R10Q9NYW0 307 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 USE1Q9NZ43 259 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 SLC7A7Q9UM01 511 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 BOKQ9UMX3 212 aaPredicted RBP13.55□□□□□ -0.24
VPS18-202ENST00000558474 RAXQ9Y2V3 346 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 HEATR5AQ86XA9 2040 aa13.55□□□□□ -0.24
VPS18-202ENST00000558474 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 SH3PXD2BA1X283 911 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 KLRC4-KLRK1H3BQV0 150 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 NME2P1O60361 137 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 CCNB2O95067 398 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 LYPD3O95274 346 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 RASAL1O95294 804 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 NUDT14O95848 222 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 ANXA8P13928 327 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 NME2P22392 152 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 FKBP2P26885 142 aaKnown RBP13.54□□□□□ -0.24
VPS18-202ENST00000558474 ADH6P28332 368 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 EIF1P41567 113 aaKnown RBP13.54□□□□□ -0.24
VPS18-202ENST00000558474 MASP1P48740 699 aa13.54□□□□□ -0.24
VPS18-202ENST00000558474 TNFSF10P50591 281 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms