RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 BHLHB9Q6PI77 547 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 C16orf62Q7Z3J2 963 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 C6orf120Q7Z4R8 191 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 HMGN2P46Q86SG4 172 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 NATD1Q8N6N6 113 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 STEAP2Q8NFT2 490 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 OR4A15Q8NGL6 344 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 RAB3IL1Q8TBN0 382 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 RNF128Q8TEB7 428 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 AKAP1Q92667 903 aaKnown RBP eCLIP13.84□□□□□ -0.19
TPM1-211ENST00000558314 COQ8BQ96D53 544 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 COX4I2Q96KJ9 171 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 OR5B2Q96R09 309 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 CENPHQ9H3R5 247 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 CXorf56Q9H5V9 222 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 L2HGDHQ9H9P8 463 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 KLHL13Q9P2N7 655 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 MKLN1Q9UL63 735 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 LAMP3Q9UQV4 416 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 DSCAMO60469 2012 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 ROS1P08922 2347 aa13.84□□□□□ -0.19
TPM1-211ENST00000558314 FAM171A2A8MVW0 826 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 HS3ST1O14792 307 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 ITM2AO43736 263 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 UBTFL6P0CB48 400 aaPredicted RBP13.83□□□□□ -0.2
TPM1-211ENST00000558314 SUMO3P55854 103 aaPredicted RBP13.83□□□□□ -0.2
TPM1-211ENST00000558314 ATP5J2P56134 94 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 SELENBP1Q13228 472 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 CBFBQ13951 182 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 CHI3L2Q15782 390 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 KRT71Q3SY84 523 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 TFAP2EQ6VUC0 442 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 ANKRD46Q86W74 232 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 OR5W2Q8NH69 310 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 KISS1RQ969F8 398 aaPredicted RBP13.83□□□□□ -0.2
TPM1-211ENST00000558314 ARL8AQ96BM9 186 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 ZNF524Q96C55 264 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 SDF2Q99470 211 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 THUMPD3Q9BV44 507 aaKnown RBP13.83□□□□□ -0.2
TPM1-211ENST00000558314 ROPN1BQ9BZX4 212 aaPredicted RBP13.83□□□□□ -0.2
TPM1-211ENST00000558314 COQ10BQ9H8M1 238 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 ROPN1Q9HAT0 212 aaPredicted RBP13.83□□□□□ -0.2
TPM1-211ENST00000558314 NOP53Q9NZM5 478 aaKnown RBP13.83□□□□□ -0.2
TPM1-211ENST00000558314 PCDHGB4Q9UN71 923 aa13.83□□□□□ -0.2
TPM1-211ENST00000558314 HEATR5AQ86XA9 2040 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 SERINC4A6NH21 518 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 FCMRO60667 390 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 CNOT4O95628 575 aaKnown RBP13.82□□□□□ -0.2
TPM1-211ENST00000558314 CSTAP01040 98 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 YES1P07947 543 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 TFPIP10646 304 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 NID1P14543 1247 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 PSMB1P20618 241 aaKnown RBP13.82□□□□□ -0.2
TPM1-211ENST00000558314 ADH6P28332 368 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 NME5P56597 212 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 EMX2Q04743 252 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 MERTKQ12866 999 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 TIGD2Q4W5G0 525 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 TNFAIP8L2Q6P589 184 aaPredicted RBP13.82□□□□□ -0.2
TPM1-211ENST00000558314 RIMKLAQ8IXN7 391 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 ZNF781Q8N8C0 355 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 PSMA8Q8TAA3 256 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 XAGE5Q8WWM1 108 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 MRGPRX4Q96LA9 322 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 GSX2Q9BZM3 304 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 DPY30Q9C005 99 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 OR51I1Q9H343 314 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 SERHL2Q9H4I8 314 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 AKTIPQ9H8T0 292 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 ACTL7BQ9Y614 415 aa13.82□□□□□ -0.2
TPM1-211ENST00000558314 NUP214P35658 2090 aaPredicted RBP13.82□□□□□ -0.2
TPM1-211ENST00000558314 CENPVL1A0A0U1RR11 272 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 DUXAA6NLW8 204 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 RGS16O15492 202 aaPredicted RBP13.81□□□□□ -0.2
TPM1-211ENST00000558314 EIF4E2O60573 245 aaKnown RBP13.81□□□□□ -0.2
TPM1-211ENST00000558314 STX11O75558 287 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 GCM2O75603 506 aaPredicted RBP13.81□□□□□ -0.2
TPM1-211ENST00000558314 LYZL6O75951 148 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 CD3EP07766 207 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 OR12D1P0DN82 309 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 CCNA2P20248 432 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 RYKP34925 604 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 CLDN8P56748 225 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 RASGEF1BQ0VAM2 473 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 TAB1Q15750 504 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 SFRP5Q5T4F7 317 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 PRSS57Q6UWY2 283 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 BHLHA15Q7RTS1 189 aaPredicted RBP13.81□□□□□ -0.2
TPM1-211ENST00000558314 ATG4DQ86TL0 474 aaPredicted RBP13.81□□□□□ -0.2
TPM1-211ENST00000558314 ZNF100Q8IYN0 542 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 ZNF563Q8TA94 476 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 NEUROG1Q92886 237 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 RAB8BQ92930 207 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 GTPBP3Q969Y2 492 aaKnown RBP13.81□□□□□ -0.2
TPM1-211ENST00000558314 ZNF300Q96RE9 604 aaPredicted RBP13.81□□□□□ -0.2
TPM1-211ENST00000558314 PAIP2Q9BPZ3 127 aaKnown RBP13.81□□□□□ -0.2
TPM1-211ENST00000558314 HDHD5Q9BXW7 423 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 SERINC1Q9NRX5 453 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 EXD2Q9NVH0 621 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 KLHL9Q9P2J3 617 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms