RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GDF7Q7Z4P5 450 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 MDGA2Q7Z553 956 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 LINC00471Q8N535 108 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 OR4K17Q8NGC6 315 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 OR4C15Q8NGM1 316 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 OR52J3Q8NH60 311 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 DNAJA4Q8WW22 397 aaPredicted RBP15.38■□□□□ 0.05
SNX1-203ENST00000558040 TMEM234Q8WY98 164 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 HAS2Q92819 552 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 SLC38A4Q969I6 547 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 DTNBP1Q96EV8 351 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 TMEM41AQ96HV5 264 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 ALPK1Q96QP1 1244 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 OSBPL10Q9BXB5 764 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 KLHL4Q9C0H6 718 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 PTGES2Q9H7Z7 377 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 SLC7A7Q9UM01 511 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 NTNG1Q9Y2I2 539 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 NINQ8N4C6 2090 aa15.38■□□□□ 0.05
SNX1-203ENST00000558040 A0A0B4J2E0 115 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 A0A1B0GWA3 101 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 A0A1B0GX12 115 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 SNPHO15079 494 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 CHP2O43745 196 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 PEX1O43933 1283 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 GMFGO60234 142 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 NEURL1O76050 574 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 CCNB2O95067 398 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 F10P00742 488 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 CD46P15529 392 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 CNR1P21554 472 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 ELAVL4P26378 380 aaKnown RBP15.37■□□□□ 0.05
SNX1-203ENST00000558040 LIMS1P48059 325 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 ZNF41P51814 821 aaPredicted RBP15.37■□□□□ 0.05
SNX1-203ENST00000558040 PPP1R8Q12972 351 aaKnown RBP15.37■□□□□ 0.05
SNX1-203ENST00000558040 MICAQ29983 383 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 EXOC3L2Q2M3D2 409 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 ALG10BQ5I7T1 473 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 SPINK14Q6IE38 97 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 OR5M10Q6IEU7 315 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 STK32CQ86UX6 486 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 TSPYL5Q86VY4 417 aaPredicted RBP15.37■□□□□ 0.05
SNX1-203ENST00000558040 ZNF227Q86WZ6 799 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 PLCZ1Q86YW0 608 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 EPHX4Q8IUS5 362 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 PACRGLQ8N7B6 248 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 OR1J4Q8NGS1 313 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 RNF217Q8TC41 542 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 GIPC3Q8TF64 312 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 NRG4Q8WWG1 115 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 TM9SF4Q92544 642 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 NTNG2Q96CW9 530 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 ZNF597Q96LX8 424 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 C5orf34Q96MH7 638 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 PLA2G3Q9NZ20 509 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 MED11Q9P086 117 aa15.37■□□□□ 0.05
SNX1-203ENST00000558040 PDP1Q9P0J1 537 aaPredicted RBP15.37■□□□□ 0.05
SNX1-203ENST00000558040 ARRDC5A6NEK1 342 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 C1QTNF9BB2RNN3 333 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 CDC40O60508 579 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■■■■ 31.7
SNX1-203ENST00000558040 RASAL1O95294 804 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 C1QTNF9P0C862 333 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 PNMTP11086 282 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 GP1BBP13224 206 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 SLC1A3P43003 542 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 QPRTQ15274 297 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 BORAQ6PGQ7 559 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 IGFL2Q6UWQ7 119 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 RRM2BQ7LG56 351 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 TMEM179BQ7Z7N9 219 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 FADS6Q8N9I5 356 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 MDS2Q8NDY4 140 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 OR2M3Q8NG83 312 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 GPR119Q8TDV5 335 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 ST8SIA1Q92185 356 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 MPP4Q96JB8 637 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 HS6ST2Q96MM7 605 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 SIGLEC12Q96PQ1 595 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 SMAD5Q99717 465 aaKnown RBP15.36■□□□□ 0.05
SNX1-203ENST00000558040 FAM173AQ9BQD7 235 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.36■□□□□ 0.058e-6■□□□□ 11.3
SNX1-203ENST00000558040 GABARAPL1Q9H0R8 117 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 DSN1Q9H410 356 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 C12orf10Q9HB07 376 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 PROK2Q9HC23 129 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 KRCC1Q9NPI7 259 aaPredicted RBP15.36■□□□□ 0.05
SNX1-203ENST00000558040 MAN2C1Q9NTJ4 1040 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 TAS2R10Q9NYW0 307 aa15.36■□□□□ 0.05
SNX1-203ENST00000558040 BOKQ9UMX3 212 aaPredicted RBP15.36■□□□□ 0.05
SNX1-203ENST00000558040 KLF13Q9Y2Y9 288 aaPredicted RBP15.36■□□□□ 0.05
SNX1-203ENST00000558040 PCDHGA9Q9Y5G4 932 aaKnown RBP15.36■□□□□ 0.05
SNX1-203ENST00000558040 A0A087WV48 116 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 TRBV4-1A0A0J9YWV2 114 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 TMEM8BA6NDV4 472 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 C17orf51A8MQB3 221 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 G3V3Y1 287 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 GNB5O14775 395 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 TRIM3O75382 744 aaPredicted RBP15.35■□□□□ 0.05
SNX1-203ENST00000558040 IFNGR2P38484 337 aa15.35■□□□□ 0.05
SNX1-203ENST00000558040 RBM34P42696 430 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms