RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 ACER3Q9NUN7 267 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 MED17Q9NVC6 651 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 NPIPA1Q9UND3 350 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 NTNG1Q9Y2I2 539 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 ARHGAP21Q5T5U3 1957 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 HIVEP3Q5T1R4 2406 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 C2orf72A6NCS6 295 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 ZIC3O60481 467 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 CDC40O60508 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 FESP07332 822 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 HOXD4P09016 255 aaPredicted RBP12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 CD247P20963 164 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 RFC3P40938 356 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 APOBEC1P41238 236 aaKnown RBP12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 CCR4P51679 360 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 NCALDP61601 193 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 KCNC4Q03721 635 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 CEACAM7Q14002 265 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 TOMM20Q15388 145 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 NRF1Q16656 503 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 CYBRD1Q53TN4 286 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 SWT1Q5T5J6 900 aaKnown RBP12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 WBP2NLQ6ICG8 309 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 OR5M10Q6IEU7 315 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 CBLL1Q75N03 491 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 GRINAQ7Z429 371 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 ATCAYQ86WG3 371 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 PM20D2Q8IYS1 436 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 LSMEM1Q8N8F7 131 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 SLC25A43Q8WUT9 341 aaPredicted RBP12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 CNOT9Q92600 299 aaKnown RBP12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 FAM162AQ96A26 154 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 MCUR1Q96AQ8 359 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 MIB2Q96AX9 1013 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 NSMCE2Q96MF7 247 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 ZNF559Q9BR84 538 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 TRIM15Q9C019 465 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 TRIM2Q9C040 744 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 DCAF13Q9NV06 445 aaKnown RBP12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 SPIN1Q9Y657 262 aaPredicted RBP12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 AP4B1Q9Y6B7 739 aa12.8□□□□□ -0.36
SUPT16H-208ENST00000557652 ZNF462Q96JM2 2506 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 GJE1A6NN92 205 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 GSC2O15499 205 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 CYP7B1O75881 506 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 C1QL1O75973 258 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 NTN1O95631 604 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 PEPDP12955 493 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 GP1BBP13224 206 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 PRKCAP17252 672 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 MST1P26927 711 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 IFNA8P32881 189 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 PTGER4P35408 488 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 SLC1A3P43003 542 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 CLK1P49759 484 aaKnown RBP12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 MLLT10P55197 1068 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 GFRA1P56159 465 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 RGS8P57771 180 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 QPRTQ15274 297 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 DUSP7Q16829 419 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 LRRC23Q53EV4 343 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 VASNQ6EMK4 673 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 LCN8Q6JVE9 175 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 PGM2L1Q6PCE3 622 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 CLIP4Q8N3C7 705 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 ZNF563Q8TA94 476 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 DNAJA4Q8WW22 397 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 GEMIN6Q8WXD5 167 aaKnown RBP12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 SFXN2Q96NB2 322 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 ARHGDIGQ99819 225 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 THTPAQ9BU02 230 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 PCDHAC1Q9H158 963 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 DEFB127Q9H1M4 99 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 EXO5Q9H790 373 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 SERINC1Q9NRX5 453 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 PAQR5Q9NXK6 330 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 CHST2Q9Y4C5 530 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 KIAA1549Q9HCM3 1950 aa12.79□□□□□ -0.36
SUPT16H-208ENST00000557652 CLDN24A6NM45 220 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 B4DXG7 233 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 ARPC2O15144 300 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 ACAA2P42765 397 aaKnown RBP12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 CRYBA2P53672 197 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 RAC1P63000 192 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 PLAURQ03405 335 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 TLE1Q04724 770 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 SELENBP1Q13228 472 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 RAET1LQ5VY80 246 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 ZNF613Q6PF04 617 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 MYO7BQ6PIF6 2116 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 C5orf46Q6UWT4 87 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 GFRALQ6UXV0 394 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 Q6ZPB1 254 aaPredicted RBP12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 PRICKLE2Q7Z3G6 844 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 DHFR2Q86XF0 187 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 RNF148Q8N7C7 305 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 SMYD1Q8NB12 490 aa12.78□□□□□ -0.36
SUPT16H-208ENST00000557652 ABTB1Q969K4 478 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms