RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TFAMQ00059 246 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 SMARCB1Q12824 385 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 LCP2Q13094 533 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 MEP1BQ16820 701 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 IQCCQ4KMZ1 466 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 LIN9Q5TKA1 542 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 LRRC38Q5VT99 294 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 WDR25Q64LD2 544 aaPredicted RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 TWF2Q6IBS0 349 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 TMEM270Q6UE05 265 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 SYT10Q6XYQ8 523 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 GCNT7Q6ZNI0 430 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 NT5DC3Q86UY8 548 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 ECHDC2Q86YB7 292 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 GPR65Q8IYL9 337 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 MCOLN2Q8IZK6 566 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 CLYBLQ8N0X4 340 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 SLC35F6Q8N357 371 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 EIF1ADQ8N9N8 165 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 TMEM35BQ8NCS4 154 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 MSANTD4Q8NCY6 345 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 MNS1Q8NEH6 495 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 OR7G3Q8NG95 312 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 OR1K1Q8NGR3 316 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 ACTRT1Q8TDG2 376 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 ZNF606Q8WXB4 792 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.71□□□□□ -1.98
VRK1-207ENST00000557352 VMP1Q96GC9 406 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 HPDLQ96IR7 371 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 CPB2Q96IY4 423 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 NAP1L3Q99457 506 aaPredicted RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 TTYH2Q9BSA4 534 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 DPEP3Q9H4B8 488 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 NXF3Q9H4D5 531 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 IKZF5Q9H5V7 419 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 LZTFL1Q9NQ48 299 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 ABCB8Q9NUT2 735 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 SENP1Q9P0U3 644 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 TBX21Q9UL17 535 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 GUCA1BQ9UMX6 200 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 SNX12Q9UMY4 172 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 HYOU1Q9Y4L1 999 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 SAR1BQ9Y6B6 198 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 ANKRD12Q6UB98 2062 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 LAMA2P24043 3122 aaKnown RBP2.71□□□□□ -1.98
VRK1-207ENST00000557352 MYLKQ15746 1914 aa2.71□□□□□ -1.98
VRK1-207ENST00000557352 SCN8AQ9UQD0 1980 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 KIAA1549LQ6ZVL6 1849 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 MYO10Q9HD67 2058 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 MACROD2A1Z1Q3 448 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 CTAGE15A4D2H0 777 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 FRG2CA6NGY1 282 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 ARL5CA6NH57 179 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 ZFP92A6NM28 416 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 SIGLEC16A6NMB1 481 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 M0R296 226 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 PSTPIP1O43586 416 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 CSO75390 466 aaKnown RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 CSDE1O75534 798 aaKnown RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 PALMO75781 387 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 ZNF189O75820 626 aaPredicted RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 PNMA6AP0CW24 399 aaPredicted RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 GHRP10912 638 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 CCL5P13501 91 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 ZNF17P17021 662 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 CD52P31358 61 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 PCK1P35558 622 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 FRKP42685 505 aaPredicted RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 ACADSBP45954 432 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 C1QTNF8P60827 252 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 RPL27P61353 136 aaKnown RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 SLC34A1Q06495 639 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 BST2Q10589 180 aaKnown RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 PIGHQ14442 188 aaPredicted RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 GPNMBQ14956 572 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 NUMA1Q14980 2115 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 CFAP221Q4G0U5 840 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 ZNF789Q5FWF6 425 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 PM20D1Q6GTS8 502 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 SPOPLQ6IQ16 392 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 LINC00696Q6ZRV3 163 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 OTOAQ7RTW8 1153 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 MTERF4Q7Z6M4 381 aaKnown RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 TMEM110Q86TL2 294 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 CTAGE6Q86UF2 777 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 PSTKQ8IV42 348 aaKnown RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 ARL14Q8N4G2 192 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 MMGT1Q8N4V1 131 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 OR2L5Q8NG80 312 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 ZNF671Q8TAW3 534 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 C18orf25Q96B23 403 aaPredicted RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 CDKN2AIPNLQ96HQ2 116 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 HSFY1Q96LI6 401 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 ACBD6Q9BR61 282 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 TMEM175Q9BSA9 504 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 TRIM62Q9BVG3 475 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 MRPL9Q9BYD2 267 aaKnown RBP2.7□□□□□ -1.98
VRK1-207ENST00000557352 SMYD3Q9H7B4 428 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 SRD5A3Q9H8P0 318 aa2.7□□□□□ -1.98
VRK1-207ENST00000557352 CSNK1G1Q9HCP0 422 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms