RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 IDO2Q6ZQW0 420 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ANKRD33Q7Z3H0 272 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 RAB42Q8N4Z0 105 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 OR52E1Q8NGJ3 308 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 POF1BQ8WVV4 589 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 PIGKQ92643 395 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 ORAI1Q96D31 301 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 PEX11GQ96HA9 241 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 PGLYRP3Q96LB9 341 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 SORCS2Q96PQ0 1159 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 OR2M2Q96R28 347 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 AUNIPQ9H7T9 357 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 CLDND1Q9NY35 253 aa10.57□□□□□ -0.72
SRP54-213ENST00000556994 PRR23AA6NEV1 266 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SLC9A3R1O14745 358 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 DNAJB6O75190 326 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SBK2P0C263 348 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SAGP10523 405 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 PRKACBP22694 351 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 POU6F2P78424 691 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 ID2Q02363 134 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 RPL6Q02878 288 aaKnown RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 ZNF267Q14586 743 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 TP53I3Q53FA7 332 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 PXDC1Q5TGL8 231 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 MFSD12Q6NUT3 480 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 COMMD7Q86VX2 200 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SLAIN1Q8ND83 568 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 TTLQ8NG68 377 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 OR51Q1Q8NH59 317 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 BRIX1Q8TDN6 353 aaKnown RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 TMEM239Q8WW34 195 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SMPDL3BQ92485 455 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 MTHFD2LQ9H903 347 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 DLL4Q9NR61 685 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 USP36Q9P275 1121 aaKnown RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 SATB2Q9UPW6 733 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 AK6Q9Y3D8 172 aaKnown RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 B8ZZF3 427 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 PEX12O00623 359 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 PAK4O96013 591 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 ADRB1P08588 477 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 EPCAMP16422 314 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 PEBP1P30086 187 aaKnown RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 WASP42768 502 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SELENOPP49908 381 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SHC2P98077 582 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SNTB2Q13425 540 aaKnown RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 CRMP1Q14194 572 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 OR1Q1Q15612 314 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 HEPHL1Q6MZM0 1159 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 GET4Q7L5D6 327 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 PXKQ7Z7A4 578 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 TPRA1Q86W33 373 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SLC44A3Q8N4M1 653 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SPERTQ8NA61 448 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 ZNF527Q8NB42 609 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 OR2L3Q8NG85 312 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 OR51L1Q8NGJ5 315 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 ADAMTS14Q8WXS8 1223 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 OTUB2Q96DC9 234 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 SPRTNQ9H040 489 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 ADGRL4Q9HBW9 690 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 MRPL39Q9NYK5 338 aaKnown RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 OR6C2Q9NZP2 312 aa10.56□□□□□ -0.72
SRP54-213ENST00000556994 CXXC1Q9P0U4 656 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 ZNF223Q9UK11 482 aaPredicted RBP10.56□□□□□ -0.72
SRP54-213ENST00000556994 ABHD14A-ACY1A0A1B0GW23 586 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 FAM86C2PA6NEL3 165 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 TRABD2BA6NFA1 517 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 ZNF593O00488 134 aaPredicted RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 SC5DO75845 299 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 OR7A10O76100 309 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 PPP1R3DO95685 299 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 HRGP04196 525 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 M6PRP20645 277 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 ZP1P60852 638 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 EEF1A1P68104 462 aaKnown RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 SIM1P81133 766 aaPredicted RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 COL28A1Q2UY09 1125 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 TRMT12Q53H54 448 aaKnown RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 MRPL2Q5T653 305 aaKnown RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 FAAH2Q6GMR7 532 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 LNX2Q8N448 690 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 GRHL3Q8TE85 626 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 WFIKKN2Q8TEU8 576 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 SDF2Q99470 211 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 CHIAQ9BZP6 476 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 TMEM168Q9H0V1 697 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 CLEC4MQ9H2X3 399 aaPredicted RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 FN3KQ9H479 309 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 METTL17Q9H7H0 456 aaPredicted RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 KRCC1Q9NPI7 259 aaPredicted RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 ZNF224Q9NZL3 707 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 PPIEQ9UNP9 301 aaKnown RBP10.55□□□□□ -0.72
SRP54-213ENST00000556994 INSL6Q9Y581 213 aa10.55□□□□□ -0.72
SRP54-213ENST00000556994 RPS10-NUDT3A0A1W2PQS6 291 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms