RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 HSD17B7P56937 341 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 NUP107P57740 925 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 GABARAPL2P60520 117 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 HPCAP84074 193 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 IL5RAQ01344 420 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 IL1RL1Q01638 556 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 SPIBQ01892 262 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CD47Q08722 323 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 STX4Q12846 297 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 PPP1R8Q12972 351 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 SLC13A2Q13183 592 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 DGCR6Q14129 220 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 SERTAD2Q14140 314 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 LASP1Q14847 261 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 LARS2Q15031 903 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 ZNHIT3Q15649 155 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 SRSF7Q16629 238 aaKnown RBP eCLIP4.12□□□□□ -1.75
SRP54-212ENST00000556992 MEP1AQ16819 746 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.12□□□□□ -1.75
SRP54-212ENST00000556992 EXOC3L2Q2M3D2 409 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 DEFB133Q30KQ1 61 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 INAVAQ3KP66 663 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 ARHGAP11BQ3KRB8 267 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 NADK2Q4G0N4 442 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 TRMT12Q53H54 448 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 ZNF628Q5EBL2 1059 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 DCST1Q5T197 706 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 MLIPQ5VWP3 458 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 LYSMD4Q5XG99 296 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 HEPHL1Q6MZM0 1159 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CDC73Q6P1J9 531 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 ZNF773Q6PK81 442 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 DHRS4L2Q6PKH6 230 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 WDR74Q6RFH5 385 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 B3GNT6Q6ZMB0 384 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 RBM44Q6ZP01 1051 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 RRM2BQ7LG56 351 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 GPR141Q7Z602 305 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 RABEPKQ7Z6M1 372 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 GALNT5Q7Z7M9 940 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 SATL1Q86VE3 508 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 WDR5BQ86VZ2 330 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 KMT5CQ86Y97 462 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 THNSL2Q86YJ6 484 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 SFTPA2Q8IWL1 248 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 OR4N5Q8IXE1 308 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CMIPQ8IY22 773 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 PEX5LQ8IYB4 626 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 OFCC1Q8IZS5 231 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 TAGAPQ8N103 731 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CA13Q8N1Q1 262 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 PARP8Q8N3A8 854 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 SLC25A45Q8N413 288 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 LNX2Q8N448 690 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CHDHQ8NE62 594 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 OR7G2Q8NG99 324 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 OR10G2Q8NGC3 310 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 OR9A4Q8NGU2 314 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 OR52P1PQ8NH57 321 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 OR52J3Q8NH60 311 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 RHOXF1Q8NHV9 184 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 ZNF675Q8TD23 568 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 APOBEC4Q8WW27 367 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 TRUB1Q8WWH5 349 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 IPCEF1Q8WWN9 437 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 KAT2AQ92830 837 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 RIT1Q92963 219 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 ANKRD9Q96BM1 317 aaPredicted RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 Q96MT0 163 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 TGM7Q96PF1 710 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 MS4A4EQ96PG1 132 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 NODALQ96S42 347 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 STACQ99469 402 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 TSC22D3Q99576 134 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 BARD1Q99728 777 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 MAP3K3Q99759 626 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 PELOQ9BRX2 385 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 GABARAPL3Q9BY60 117 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 UCK2Q9BZX2 261 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 QRSL1Q9H0R6 528 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 ANKRD19PQ9H560 264 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CXorf21Q9HAI6 301 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 CCNB1IP1Q9NPC3 277 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 DUSP22Q9NRW4 184 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 STARD5Q9NSY2 213 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 IRAK4Q9NWZ3 460 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 SOHLH2Q9NX45 425 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 VNN3Q9NY84 501 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 KCND3Q9UK17 655 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 MRPS2Q9Y399 296 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 PCDHGA8Q9Y5G5 932 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 SNX5Q9Y5X3 404 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 RNF215Q9Y6U7 377 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 MTCL1Q9Y4B5 1905 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 MAST4O15021 2626 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 FLNBO75369 2602 aaKnown RBP4.12□□□□□ -1.75
SRP54-212ENST00000556992 CACNA1BQ00975 2339 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 ACACBO00763 2458 aa4.12□□□□□ -1.75
SRP54-212ENST00000556992 F5P12259 2224 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms