RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 DIDO1Q9BTC0 2240 aaKnown RBP9.63□□□□□ -0.87
LINC00239-201ENST00000556973 HEATR5AQ86XA9 2040 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 GMNCA6NCL1 334 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 GJE1A6NN92 205 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 BBIP1A8MTZ0 92 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 C5orf58C9J3I9 102 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 ETV2O00321 342 aaPredicted RBP9.62□□□□□ -0.87
LINC00239-201ENST00000556973 FBP2O00757 339 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 EIF1AYO14602 144 aaKnown RBP9.62□□□□□ -0.87
LINC00239-201ENST00000556973 DVL2O14641 736 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 ADAMDEC1O15204 470 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 SEC14L5O43304 696 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 EFNA2O43921 213 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 PGM3O95394 542 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 IL18BPO95998 194 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 THBS1P07996 1170 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 NUDT7P0C024 238 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 TMIGD3P0DMS9 266 aaPredicted RBP9.62□□□□□ -0.87
LINC00239-201ENST00000556973 NID1P14543 1247 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 CTSSP25774 331 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 GRNP28799 593 aaKnown RBP9.62□□□□□ -0.87
LINC00239-201ENST00000556973 CCR4P51679 360 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 SEC24CP53992 1094 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 FOXF1Q12946 379 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 LARS2Q15031 903 aaKnown RBP9.62□□□□□ -0.87
LINC00239-201ENST00000556973 SGCBQ16585 318 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 SLC25A35Q3KQZ1 300 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 MMEL1Q495T6 779 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 COQ5Q5HYK3 327 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 PDSS1Q5T2R2 415 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 OR2A2Q6IF42 318 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 P4HA3Q7Z4N8 544 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 CPLX4Q7Z7G2 160 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 HMGN2P46Q86SG4 172 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 GRAMD2AQ8IUY3 354 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF440Q8IYI8 595 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 C9orf106Q8NAJ2 232 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 NAXEQ8NCW5 288 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF563Q8TA94 476 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 CGREF1Q99674 301 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 ELAC2Q9BQ52 826 aaKnown RBP9.62□□□□□ -0.87
LINC00239-201ENST00000556973 CPPED1Q9BRF8 314 aaPredicted RBP9.62□□□□□ -0.87
LINC00239-201ENST00000556973 UCK2Q9BZX2 261 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 TMEM38AQ9H6F2 299 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 ACER3Q9NUN7 267 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 CLCF1Q9UBD9 225 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 DOPEY2Q9Y3R5 2298 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 COL12A1Q99715 3063 aa9.62□□□□□ -0.87
LINC00239-201ENST00000556973 LOC100653049A0A140TA62 436 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 CDHR4A6H8M9 788 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 NKX2-6A6NCS4 301 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 SLC22A20A6NK97 555 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 CLDN24A6NM45 220 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 FAM90A27PA6NNH2 459 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 H0YC42 278 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 BCAS1O75363 584 aaPredicted RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 KRT34O76011 436 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 NTN1O95631 604 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 TGM6O95932 706 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 OPN1LWP04000 364 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 CRHP06850 196 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 PABPC4LP0CB38 370 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 ARAFP10398 606 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 ETS2P15036 469 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 SLC6A2P23975 617 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 FKBP2P26885 142 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 LSP1P33241 339 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 RYKP34925 604 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 OPRM1P35372 400 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 APOBEC1P41238 236 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 EIF1AXP47813 144 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF136P52737 540 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 TPD52P55327 224 aaPredicted RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 DLX5P56178 289 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 CARD18P57730 90 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 SESN3P58005 492 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 CDK6Q00534 326 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 SELENBP1Q13228 472 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 CYLC2Q14093 348 aaPredicted RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 CTU2Q2VPK5 515 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 LIN52Q52LA3 116 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF311Q5JNZ3 666 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 GCNT6Q5T4J0 391 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 MRPL2Q5T653 305 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 HIST2H2BCQ6DN03 193 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 REEP3Q6NUK4 255 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 POMZP3Q6PJE2 187 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 SPATA21Q7Z572 469 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 VRK2Q86Y07 508 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 PCYOX1LQ8NBM8 494 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 BBS10Q8TAM1 723 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 CNOT9Q92600 299 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 OSTF1Q92882 214 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 MAL2Q969L2 176 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF524Q96C55 264 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 ADGRG7Q96K78 797 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 SH3GL1Q99961 368 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 PINK1Q9BXM7 581 aa9.61□□□□□ -0.87
LINC00239-201ENST00000556973 NSRP1Q9H0G5 558 aaKnown RBP9.61□□□□□ -0.87
LINC00239-201ENST00000556973 IKZF5Q9H5V7 419 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms