RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 C6orf120Q7Z4R8 191 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CAMKMTQ7Z624 323 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 LILRA2Q8N149 483 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 GTPBP8Q8N3Z3 284 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CHDHQ8NE62 594 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 OR4A15Q8NGL6 344 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 LINC01560Q8TB33 94 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 FNDC9Q8TBE3 224 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 OTUB1Q96FW1 271 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF845Q96IR2 970 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ZBTB18Q99592 522 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 GPATCH1Q9BRR8 931 aaKnown RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 NUF2Q9BZD4 464 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CXorf36Q9H7Y0 433 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 RNF122Q9H9V4 155 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 GLRX2Q9NS18 164 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 SIRT3Q9NTG7 399 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 MED17Q9NVC6 651 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 GALNT8Q9NY28 637 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ELOVL5Q9NYP7 299 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 TMEM120BA0PK00 339 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 C7orf72A4D263 438 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 SH3D21A4FU49 640 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 C17orf51A8MQB3 221 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 DHRS4L1P0CG22 281 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 ARRB2P32121 409 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 S100A3P33764 101 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 P2RX1P51575 399 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 ART1P52961 327 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 SUCLG1P53597 346 aaKnown RBP6.59□□□□□ -1.35
SCFD1-222ENST00000556768 SUMO3P55854 103 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-222ENST00000556768 HPCAP84074 193 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 CBFBQ13951 182 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 KEAP1Q14145 624 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 KLHL26Q53HC5 615 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 OR4F3Q6IEY1 312 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 SPATA19Q7Z5L4 167 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 METTL25Q8N6Q8 603 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 TOR1AIP2Q8NFQ8 470 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 OR5AK3PQ8NH89 298 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 TESCQ96BS2 214 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 STARD4Q96DR4 205 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 RNF145Q96MT1 663 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 MED18Q9BUE0 208 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 RTN4RQ9BZR6 473 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 GPATCH2Q9NW75 528 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 PROCRQ9UNN8 238 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 CARD8Q9Y2G2 431 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 DTNAQ9Y4J8 743 aa6.59□□□□□ -1.35
SCFD1-222ENST00000556768 INTS1Q8N201 2190 aaKnown RBP6.59□□□□□ -1.36
SCFD1-222ENST00000556768 ANKRD17O75179 2603 aaKnown RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 CACNA1CQ13936 2221 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 RNF103-CHMP3A0A140T963 221 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 E9PBE3 544 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 H0YC42 278 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 C16orf97H3BN30 126 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 ADAMDEC1O15204 470 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 HDAC3O15379 428 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF264O43296 627 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 EIF4E2O60573 245 aaKnown RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 CYP7B1O75881 506 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 TNFSF13O75888 250 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 CPSF4O95639 269 aaKnown RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 CD8BP10966 210 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 UBL4AP11441 157 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 POU2F1P14859 743 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 UQCRC2P22695 453 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 ELK4P28324 431 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 SLC7A1P30825 629 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 PCYT1AP49585 367 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 CCR4P51679 360 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 SLC18A1P54219 525 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 TPD52P55327 224 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 SIRPAP78324 504 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 BST1Q10588 318 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 GNA13Q14344 377 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 GPR68Q15743 365 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 PLPPR5Q32ZL2 321 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 TNFAIP8L3Q5GJ75 292 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 HBMQ6B0K9 141 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 NXNQ6DKJ4 435 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 PLXDC2Q6UX71 529 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 SPNS3Q6ZMD2 512 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 EIF3MQ7L2H7 374 aaKnown RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 CDC20BQ86Y33 519 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 TMCO5AQ8N6Q1 288 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 GLB1L3Q8NCI6 653 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 OR10D3Q8NH80 312 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 OR2V1Q8NHB1 315 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 RFWD2Q8NHY2 731 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 RAB3IL1Q8TBN0 382 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 MGARPQ8TDB4 240 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 XAGE5Q8WWM1 108 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 TMEM234Q8WY98 164 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 FIG4Q92562 907 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 OSTF1Q92882 214 aa6.58□□□□□ -1.36
SCFD1-222ENST00000556768 RCC1LQ96I51 464 aaKnown RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 GMPPAQ96IJ6 420 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-222ENST00000556768 OR7D2Q96RA2 312 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms