RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 GOLGA6L4A6NEF3 574 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 EPM2AB3EWF7 344 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 G3V3Y1 287 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 SH3BGRLO75368 114 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 UGT2B17O75795 530 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 F10P00742 488 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 PNMTP11086 282 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 CCDC130P13994 396 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 SERPINA2P20848 420 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 LAP3P28838 519 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 ETV5P41161 510 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 MAGEA8P43361 318 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 ACTR3P61158 418 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 RPL23AP62750 156 aaKnown RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 COX10Q12887 443 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 CYLC2Q14093 348 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 STXBP4Q6ZWJ1 553 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 RUFY3Q7L099 469 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 TMEM123Q8N131 208 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 UBE2J2Q8N2K1 259 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 CEP112Q8N8E3 955 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 TRUB1Q8WWH5 349 aaKnown RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 PIGCQ92535 297 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 PIWIL1Q96J94 861 aaKnown RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 IQCGQ9H095 443 aaKnown RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 GLT8D2Q9H1C3 349 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 OPN3Q9H1Y3 402 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 ADNPQ9H2P0 1102 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 SGK2Q9HBY8 427 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 MEPEQ9NQ76 525 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 NMRK1Q9NWW6 199 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 PRODH2Q9UF12 536 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 ZNF221Q9UK13 617 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 DDX19BQ9UMR2 479 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 NAALAD2Q9Y3Q0 740 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 TOP2AP11388 1531 aaKnown RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 TIAM1Q13009 1591 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 NLRP1Q9C000 1473 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 ROCK1Q13464 1354 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 GOLGA6L7A0A1B0GV03 622 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 FAM47DPA6NHR8 397 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 POLR2DO15514 142 aaKnown RBP3.43□□□□□ -1.86
PRPF39-210ENST00000556718 CIB2O75838 187 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 IMPDH1P20839 514 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 PEX19P40855 299 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 EPS15P42566 896 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 HMGCS2P54868 508 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 SLC8A3P57103 927 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 RPL8P62917 257 aaKnown RBP3.43□□□□□ -1.86
PRPF39-210ENST00000556718 VLDLRP98155 873 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 RAB40BQ12829 278 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 SSX2Q16385 188 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 NHLRC3Q5JS37 347 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 PHYHD1Q5SRE7 291 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 BEND3Q5T5X7 828 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 LEMD1Q68G75 181 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 PAQR6Q6TCH4 344 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 UTS2BQ765I0 119 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 SLC25A42Q86VD7 318 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 TGIF2LXQ8IUE1 241 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 CDH26Q8IXH8 852 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 LRRC75A-AS1Q8N1F1 130 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 CLEC4FQ8N1N0 589 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 OR5D13Q8NGL4 314 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 VN1R17PQ8TDU5 208 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 RASL10AQ92737 203 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 PELI1Q96FA3 418 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 TMEM80Q96HE8 168 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 ATOH8Q96SQ7 321 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 GON7Q9BXV9 100 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 NAT10Q9H0A0 1025 aaKnown RBP3.43□□□□□ -1.86
PRPF39-210ENST00000556718 ZBP1Q9H171 429 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 PPDPFQ9H3Y8 114 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 RAB18Q9NP72 206 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 SLC17A5Q9NRA2 495 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 SEC14L3Q9UDX4 400 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 PIGLQ9Y2B2 252 aa3.43□□□□□ -1.86
PRPF39-210ENST00000556718 MROH2BQ7Z745 1585 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 METP08581 1390 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 PNPLA6Q8IY17 1366 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 CTAGE15A4D2H0 777 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 SAGE2PA6NJ88 616 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 E9PAM4 449 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 E9PLD3 99 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 E9PQ18 207 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 G3V4G9 280 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 EFNA2O43921 213 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 GALR3O60755 368 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 SERPINA3P01011 423 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 CAPN1P07384 714 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 MELTFP08582 738 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 ALOX5P09917 674 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 ALPIP09923 528 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 CT45A10P0DMU9 189 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 BCL3P20749 454 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 GDI1P31150 447 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 YWHABP31946 246 aaKnown RBP3.42□□□□□ -1.86
PRPF39-210ENST00000556718 GCKP35557 465 aa3.42□□□□□ -1.86
PRPF39-210ENST00000556718 HMGCLP35914 325 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms