RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CCNJQ5T5M9 372 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 FBXW9Q5XUX1 488 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 FAM71E1Q6IPT2 247 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 GALNT18Q6P9A2 607 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 TMCO5AQ8N6Q1 288 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF540Q8NDQ6 660 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 TOR1AIP2Q8NFQ8 470 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 CEP70Q8NHQ1 597 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 RFWD2Q8NHY2 731 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 APH1AQ96BI3 265 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 OR5B2Q96R09 309 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF382Q96SR6 550 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 BHLHE41Q9C0J9 482 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-219ENST00000556432 TAS2R7Q9NYW3 318 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 EMC3Q9P0I2 261 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 SAR1BQ9Y6B6 198 aa12.23□□□□□ -0.45
ACTN1-219ENST00000556432 NPIPA5A0A0B4J1W7 369 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 A0A1W2PQD3 144 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 CCDC151A5D8V7 595 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF724A8MTY0 619 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 NPIPA7E9PJI5 369 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ATP6V1G2-DDX39BF2Z307 99 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 GTPBP1O00178 669 aaKnown RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 SMAD9O15198 467 aaKnown RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 CYTIPO60759 359 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ALOX5P09917 674 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 NPIPA8P0DM63 369 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ACP2P11117 423 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 SERPINB4P48594 390 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 CCR4P51679 360 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 SELENBP1Q13228 472 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 TRADDQ15628 312 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 TOMM34Q15785 309 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 DUSP5Q16690 384 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 IMPG1Q17R60 797 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF614Q8N883 585 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ANKS4BQ8N8V4 417 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF527Q8NB42 609 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 SLC16A11Q8NCK7 471 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 NUP43Q8NFH3 380 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 FBXO25Q8TCJ0 367 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 GCDHQ92947 438 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ARL8AQ96BM9 186 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 MS4A4EQ96PG1 132 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 IQCGQ9H095 443 aaKnown RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ANKZF1Q9H8Y5 726 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 ASB6Q9NWX5 421 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 GIN1Q9NXP7 522 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 CARD8Q9Y2G2 431 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 NOSIPQ9Y314 301 aaKnown RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 UTP11Q9Y3A2 253 aaKnown RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 POLR3HQ9Y535 204 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 TIMM22Q9Y584 194 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 TGP01266 2768 aa12.22□□□□□ -0.45
ACTN1-219ENST00000556432 HEATR1Q9H583 2144 aaKnown RBP12.22□□□□□ -0.45
ACTN1-219ENST00000556432 H3BNH8 94 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 PDPK1O15530 556 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 OIP5O43482 229 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 RAD51CO43502 376 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 VENTXO95231 258 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 INHBAP08476 426 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 PRKCAP17252 672 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 TAC1P20366 129 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 ATP6V1C1P21283 382 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 APEX1P27695 318 aaKnown RBP12.21□□□□□ -0.45
ACTN1-219ENST00000556432 LCN1P31025 176 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 P2RX1P51575 399 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 SUMO3P55854 103 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-219ENST00000556432 CAV1Q03135 178 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 NDUFAF6Q330K2 333 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 C9orf135Q5VTT2 229 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 CBLN3Q6UW01 205 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 ZFP28Q8NHY6 868 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 ZNF75CPQ92670 426 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-219ENST00000556432 CIDECQ96AQ7 238 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-219ENST00000556432 MRGPRX4Q96LA9 322 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 KCNA7Q96RP8 456 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 C1QTNF3Q9BXJ4 246 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 METTL17Q9H7H0 456 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-219ENST00000556432 TAS2R16Q9NYV7 291 aa12.21□□□□□ -0.45
ACTN1-219ENST00000556432 RGS9O75916 674 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-219ENST00000556432 ENO1P06733 434 aaKnown RBP12.2□□□□□ -0.46
ACTN1-219ENST00000556432 PHBP35232 272 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 MAP3K8P41279 467 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 CHN2P52757 468 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 GNG11P61952 73 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 POU6F2P78424 691 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-219ENST00000556432 OR7E24Q6IFN5 339 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 ANKRD26P1Q6NSI1 321 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 C3orf33Q6P1S2 294 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 IKBIPQ70UQ0 350 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 MTERF4Q7Z6M4 381 aaKnown RBP12.2□□□□□ -0.46
ACTN1-219ENST00000556432 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 ZFAND2BQ8WV99 257 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 C16orf58Q96GQ5 468 aa12.2□□□□□ -0.46
ACTN1-219ENST00000556432 SNX18Q96RF0 628 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms