RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 WBP11Q9Y2W2 641 aaKnown RBP4.26□□□□□ -1.73
ATXN3-237ENST00000556274 KLF13Q9Y2Y9 288 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-237ENST00000556274 TMED5Q9Y3A6 229 aa4.26□□□□□ -1.73
ATXN3-237ENST00000556274 CLDN16Q9Y5I7 305 aa4.26□□□□□ -1.73
ATXN3-237ENST00000556274 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.26□□□□□ -1.73
ATXN3-237ENST00000556274 CACNA1CQ13936 2221 aa4.26□□□□□ -1.73
ATXN3-237ENST00000556274 SPTA1P02549 2419 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 HIVEP3Q5T1R4 2406 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 A0A1W2PQ72 361 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 C9JVG2 144 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 NPIPA2E9PIF3 369 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 NPIPA3F8WFD2 350 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 SLCO1B7G3V0H7 640 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 CCL21O00585 134 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 LRRTM2O43300 516 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 EMC8O43402 210 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ASNA1O43681 348 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 HS6ST1O60243 411 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 NME2P1O60361 137 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ZNF354AO60765 605 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 NEURL1O76050 574 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 WISP2O76076 250 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 SORBS2O94875 1100 aaKnown RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 CBX6O95503 412 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ANP32DO95626 131 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 C6orf47O95873 294 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ATP1B1P05026 303 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 TPOP07202 933 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 VIMP08670 466 aaKnown RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 DHRS4L1P0CG22 281 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 CCL3P10147 92 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 LAMP1P11279 417 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ZNF24P17028 368 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 NCF2P19878 526 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 PRPS1L1P21108 318 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 S1PR1P21453 382 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 DRD5P21918 477 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 GPX3P22352 226 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 MST1P26927 711 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 GDF1P27539 372 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 EPHA3P29320 983 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 S100A3P33764 101 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 GALNSP34059 522 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 CHI3L1P36222 383 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 RPL3P39023 403 aaKnown RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 PPICP45877 212 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 TRPC1P48995 793 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 CCT3P49368 545 aaKnown RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 CLK3P49761 638 aaKnown RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 DGKQP52824 942 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 DIO3P55073 304 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 UFM1P61960 85 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 HSF1Q00613 529 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 PLCXD2Q0VAA5 305 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 FUT7Q11130 342 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 SLC10A1Q14973 349 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 KIAA0040Q15053 153 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 MPEG1Q2M385 716 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR5M10Q6IEU7 315 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR4F3Q6IEY1 312 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 RGS7BPQ6MZT1 257 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 RPUSD3Q6P087 351 aaKnown RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 C3P1Q6ZMU1 363 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ZNF621Q6ZSS3 439 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 IKBIPQ70UQ0 350 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 NUP54Q7Z3B4 507 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 SPATA19Q7Z5L4 167 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 GALNT10Q86SR1 603 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 FJX1Q86VR8 437 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 SLC22A16Q86VW1 577 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ANKRD46Q86W74 232 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 KIRREL3Q8IZU9 778 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 CLEC4FQ8N1N0 589 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 FAM109AQ8N4B1 249 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ZNF615Q8N8J6 731 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 VPS37AQ8NEZ2 397 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 BOD1L1Q8NFC6 3051 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR2M7Q8NG81 312 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR7G2Q8NG99 324 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR10G3Q8NGC4 313 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR4N2Q8NGD1 307 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR4A15Q8NGL6 344 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR5M9Q8NGP3 310 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR8K3Q8NH51 312 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OR5AK3PQ8NH89 298 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 CEP70Q8NHQ1 597 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 NUBPLQ8TB37 319 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 TMBIM1Q969X1 311 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 MIB2Q96AX9 1013 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 EFHD2Q96C19 240 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 NMD3Q96D46 503 aaKnown RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 TMCO6Q96DC7 493 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 SPACA9Q96E40 222 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OMA1Q96E52 524 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ELP4Q96EB1 424 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ZBED6CLQ96FA7 236 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 OTUB1Q96FW1 271 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 C16orf58Q96GQ5 468 aa4.25□□□□□ -1.73
ATXN3-237ENST00000556274 METTL2AQ96IZ6 378 aaKnown RBP4.25□□□□□ -1.73
ATXN3-237ENST00000556274 ZNF681Q96N22 645 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms