RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 CYP4Z1Q86W10 505 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 ADGRG5Q8IZF4 528 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 FAM86B1Q8N7N1 296 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF563Q8TA94 476 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 VANGL1Q8TAA9 524 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 CANT1Q8WVQ1 401 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 ST8SIA1Q92185 356 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 ZBTB8AQ96BR9 441 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 SLC47A1Q96FL8 570 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 DUS3LQ96G46 650 aaKnown RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 RSRC1Q96IZ7 334 aaKnown RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 C7orf34Q96L11 122 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 SEPHS2Q99611 448 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 MCHR1Q99705 422 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 DENND2DQ9H6A0 471 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 YY1AP1Q9H869 796 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 ACKR4Q9NPB9 350 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 CCM2LQ9NUG4 571 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 ACER3Q9NUN7 267 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 MED17Q9NVC6 651 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 TAS2R10Q9NYW0 307 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 FAM32AQ9Y421 112 aaKnown RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 TLN1Q9Y490 2541 aaKnown RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 CPAMD8Q8IZJ3 1885 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 C7orf72A4D263 438 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 B4DXG7 233 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ANKRD65E5RJM6 399 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 LINC01387J3KSC0 135 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 FRS3O43559 492 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ZIC3O60481 467 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 TPST2O60704 377 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ADAM11O75078 769 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 FABP3P05413 133 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 HPNP05981 417 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 RFPL3SP0C7P2 107 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 GP1BBP13224 206 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF24P17028 368 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 RHCEP18577 417 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 TNFRSF1BP20333 461 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 GDF1P27539 372 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 SLC7A1P30825 629 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 HTR3AP46098 478 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 CCNIQ14094 377 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 KPNB1Q14974 876 aaKnown RBP11.32□□□□□ -0.6
SHMT2-221ENST00000555773 QPRTQ15274 297 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 OR1Q1Q15612 314 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 SLC25A53Q5H9E4 307 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF613Q6PF04 617 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 RBM45Q8IUH3 476 aaKnown RBP11.32□□□□□ -0.6
SHMT2-221ENST00000555773 LACC1Q8IV20 430 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 FAM109AQ8N4B1 249 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 TMEM251Q8N6I4 163 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 PAPD5Q8NDF8 572 aaKnown RBP11.32□□□□□ -0.6
SHMT2-221ENST00000555773 OR4D11Q8NGI4 311 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 PHF10Q8WUB8 498 aaKnown RBP11.32□□□□□ -0.6
SHMT2-221ENST00000555773 DNAJA4Q8WW22 397 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-221ENST00000555773 MRGPRX4Q96LA9 322 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF347Q96SE7 839 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 WFDC6Q9BQY6 131 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 CHID1Q9BWS9 393 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 AMBRA1Q9C0C7 1298 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 OR2B2Q9GZK3 357 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ADAM19Q9H013 955 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF703Q9H7S9 590 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ZDHHC11Q9H8X9 412 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 NDUFAF4Q9P032 175 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 RPS6KB2Q9UBS0 482 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 DKKL1Q9UK85 242 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 AURKCQ9UQB9 309 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 HRH3Q9Y5N1 445 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ENPP4Q9Y6X5 453 aa11.32□□□□□ -0.6
SHMT2-221ENST00000555773 ATXN7O15265 892 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 GMFGO60234 142 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 CDC40O60508 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 TRAPPC6AO75865 159 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 OR5F1O95221 314 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 THRBP10828 461 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 PRKCAP17252 672 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 HK1P19367 917 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 FKBP2P26885 142 aaKnown RBP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 RFC3P40938 356 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 APOBEC1P41238 236 aaKnown RBP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 MAGEA2P43356 314 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 MAP2K6P52564 334 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 SESN3P58005 492 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 HOXC5Q00444 222 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 ALDH6A1Q02252 535 aaKnown RBP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 LY6DQ14210 128 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 TOMM20Q15388 145 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 TOMM34Q15785 309 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 NPTX1Q15818 432 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 PLPPR5Q32ZL2 321 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 IQCCQ4KMZ1 466 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 ENTPD8Q5MY95 495 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
SHMT2-221ENST00000555773 ZFP1Q6P2D0 407 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 ULK3Q6PHR2 472 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 ARSKQ6UWY0 536 aa11.31□□□□□ -0.6
SHMT2-221ENST00000555773 DEF8Q6ZN54 512 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms