RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 NUDCD3Q8IVD9 361 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 ZNF611Q8N823 705 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 ZNF527Q8NB42 609 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 OR5D16Q8NGK9 328 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 FBXO27Q8NI29 283 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 SFXN5Q8TD22 340 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 ROBO4Q8WZ75 1007 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 MOAP1Q96BY2 351 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 PKNOX2Q96KN3 472 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 OR7D2Q96RA2 312 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 SDF2Q99470 211 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 TMEM204Q9BSN7 226 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 DUSP26Q9BV47 211 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 SRXN1Q9BYN0 137 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 HOXD1Q9GZZ0 328 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 SERHL2Q9H4I8 314 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 GLRX2Q9NS18 164 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 ASIC5Q9NY37 505 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 ACTL7BQ9Y614 415 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 PLCE1Q9P212 2302 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 UQCRHLA0A096LP55 91 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 A8MV72 311 aaPredicted RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 ESPNB1AK53 854 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 H3BNH8 94 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 GTPBP1O00178 669 aaKnown RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 ZNF195O14628 629 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 CFLARO15519 480 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 NTN1O95631 604 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 NUDT14O95848 222 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 TUBBP07437 444 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 PPP3CBP16298 524 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 PRKCAP17252 672 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 ELK4P28324 431 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 ADH6P28332 368 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 AGTR1P30556 359 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 SOAT1P35610 550 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 SUMO3P55854 103 aaPredicted RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 RPS26P62854 115 aaKnown RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 MAD2L1Q13257 205 aaPredicted RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 PGS1Q32NB8 556 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 OR4F3Q6IEY1 312 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 BEND4Q6ZU67 534 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 CLECL1Q8IZS7 167 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 CLEC4FQ8N1N0 589 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 ZNF614Q8N883 585 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 ZNF781Q8N8C0 355 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 LILRB1Q8NHL6 650 aaPredicted RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 GPR119Q8TDV5 335 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 RNF128Q8TEB7 428 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 ABHD3Q8WU67 409 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 PPP1R36Q96LQ0 422 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 C19orf24Q9BVV8 132 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 C20orf27Q9GZN8 174 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 CXorf56Q9H5V9 222 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 NOP53Q9NZM5 478 aaKnown RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 KCNE5Q9UJ90 142 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 DTNAQ9Y4J8 743 aa9.62□□□□□ -0.87
TDP1-212ENST00000555565 GPC6Q9Y625 555 aaPredicted RBP9.62□□□□□ -0.87
TDP1-212ENST00000555565 A0A096LNT2 108 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 CENPVL1A0A0U1RR11 272 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 WDR91A4D1P6 747 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 HAX1O00165 279 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 ETV2O00321 342 aaPredicted RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 GPRIN2O60269 458 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 FCMRO60667 390 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 TP53P04637 393 aaPredicted RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 SERPINE1P05121 402 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 PABPC4LP0CB38 370 aaKnown RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 PSMB1P20618 241 aaKnown RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 SRSF2Q01130 221 aaKnown RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 ZNF844Q08AG5 666 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 VEZF1Q14119 521 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 CHI3L2Q15782 390 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 PDCD2Q16342 344 aaPredicted RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 SMU1Q2TAY7 513 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 KRT71Q3SY84 523 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 TMEM176BQ3YBM2 270 aaPredicted RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 SLC25A53Q5H9E4 307 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 BEX5Q5H9J7 111 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 PDZK1Q5T2W1 519 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 GTF2IRD2BQ6EKJ0 949 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 BHLHB9Q6PI77 547 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 OLIG3Q7RTU3 272 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 NUFIP2Q7Z417 695 aaKnown RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 C6orf120Q7Z4R8 191 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 GTF2IRD2Q86UP8 949 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 STK32CQ86UX6 486 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 MREGQ8N565 214 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 OR5W2Q8NH69 310 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 RFWD2Q8NHY2 731 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 CPNE4Q96A23 557 aaPredicted RBP9.61□□□□□ -0.87
TDP1-212ENST00000555565 ZIM3Q96PE6 472 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 ACTR6Q9GZN1 396 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 NMUR2Q9GZQ4 415 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 COQ10BQ9H8M1 238 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 AKTIPQ9H8T0 292 aa9.61□□□□□ -0.87
TDP1-212ENST00000555565 TIGARQ9NQ88 270 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms