RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SP1P08047 785 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 CT45A8P0DMV1 189 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 CT45A9P0DMV2 189 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ARAFP10398 606 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ACP2P11117 423 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ANXA8P13928 327 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 MATN1P21941 496 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 KRT20P35900 424 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 PPICP45877 212 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 PRIM2P49643 509 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 SLC35A2P78381 396 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 PPP1R8Q12972 351 aaKnown RBP9.04□□□□□ -0.96
PSEN1-213ENST00000555386 NPRL3Q12980 569 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 MLC1Q15049 377 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 CT45A2Q5DJT8 189 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ANKRD34AQ69YU3 496 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 BICRALQ6AI39 1079 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 SLC25A25Q6KCM7 469 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 MFSD12Q6NUT3 480 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 C6orf120Q7Z4R8 191 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ZNF227Q86WZ6 799 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ANKRD13BQ86YJ7 626 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ARMC8Q8IUR7 673 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 Q8NA96 180 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ATG16L2Q8NAA4 619 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 LSM14AQ8ND56 463 aaKnown RBP9.04□□□□□ -0.96
PSEN1-213ENST00000555386 OR56A1Q8NGH5 318 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 OR5D16Q8NGK9 328 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 GIPC3Q8TF64 312 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 GEMIN6Q8WXD5 167 aaKnown RBP9.04□□□□□ -0.96
PSEN1-213ENST00000555386 TP53INP1Q96A56 240 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 SPACA9Q96E40 222 aaPredicted RBP9.04□□□□□ -0.96
PSEN1-213ENST00000555386 HRASLS5Q96KN8 279 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 SLC35G5Q96KT7 338 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 JSRP1Q96MG2 331 aaPredicted RBP9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ADOQ96SZ5 270 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 RNF32Q9H0A6 362 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 TSPAN10Q9H1Z9 355 aaPredicted RBP9.04□□□□□ -0.96
PSEN1-213ENST00000555386 RUBCNLQ9H714 662 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 NEUROD4Q9HD90 331 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 PALMDQ9NP74 551 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 GPATCH2Q9NW75 528 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 GPR55Q9Y2T6 319 aaPredicted RBP9.04□□□□□ -0.96
PSEN1-213ENST00000555386 NCKAP5O14513 1909 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 ZNF462Q96JM2 2506 aa9.04□□□□□ -0.96
PSEN1-213ENST00000555386 MED12Q93074 2177 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 SHANK1Q9Y566 2161 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 GTF3C1Q12789 2109 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 A0A1W2PPW3 197 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ARRDC5A6NEK1 342 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 TNFRSF11BO00300 401 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 SLC28A2O43868 658 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 BCL10O95999 233 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 P04436 131 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ALOX5P09917 674 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 CCL3P10147 92 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ETFAP13804 333 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 DRD5P21918 477 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 IL12BP29460 328 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 TRHRP34981 398 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 MAGEA8P43361 318 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 RNF144AP50876 292 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 PCBP3P57721 371 aaKnown RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 DCAF7P61962 342 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 CDK6Q00534 326 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 PSG6Q00889 435 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 MAD2L1BPQ15013 274 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 MOGQ16653 247 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 DUSP5Q16690 384 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ZNF829Q3KNS6 432 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ZNF791Q3KP31 576 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 CCNJQ5T5M9 372 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 TNFAIP8L2Q6P589 184 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 FIGNL1Q6PIW4 674 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 RTL4Q6ZR62 310 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 GALNT5Q7Z7M9 940 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 SLC34A3Q8N130 599 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ARMC10Q8N2F6 343 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 COX18Q8N8Q8 333 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 TMEM178AQ8NBL3 297 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 SLC16A11Q8NCK7 471 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 PSD4Q8NDX1 1056 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 MDS2Q8NDY4 140 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 BPIFB6Q8NFQ5 453 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ADAMTS15Q8TE58 950 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 DIO2Q92813 273 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 CDS1Q92903 461 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 BORCS5Q969J3 196 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 MAL2Q969L2 176 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 NEURL3Q96EH8 262 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 HSPBAP1Q96EW2 488 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ZNF300Q96RE9 604 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 BARD1Q99728 777 aaKnown RBP9.03□□□□□ -0.96
PSEN1-213ENST00000555386 DCUN1D5Q9BTE7 237 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 Q9N2J8 555 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 PLCXD1Q9NUJ7 323 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ETAA1Q9NY74 926 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 NDUFAF4Q9P032 175 aa9.03□□□□□ -0.96
PSEN1-213ENST00000555386 ENPP5Q9UJA9 477 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms