RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GFM1Q96RP9 751 aaKnown RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 ARRDC1-AS1Q9H2J1 176 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 SCN3BQ9NY72 215 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 RARRES3Q9UL19 164 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 MKL2Q9ULH7 1088 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 VPS13AQ96RL7 3174 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 IGKV1D-42A0A075B6H8 117 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 LNP1A1A4G5 178 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 A8MUA0 341 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 CDX4O14627 284 aaPredicted RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 POLR1CO15160 346 aaPredicted RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 NADKO95544 446 aaPredicted RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 TSPAN19P0C672 248 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 EEF1B2P24534 225 aaKnown RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 GPR4P46093 362 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 PCYT1AP49585 367 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 TMED10P49755 219 aaKnown RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 DUSP3P51452 185 aaPredicted RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 NUDT6P53370 316 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 DCDP81605 110 aaKnown RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 AQP6Q13520 282 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 GINS1Q14691 196 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 NSDHLQ15738 373 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 AHSA2Q719I0 299 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 CLVS1Q8IUQ0 354 aaPredicted RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 ERI1Q8IV48 349 aaKnown RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 SLC7A5P1Q8MH63 180 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 OR8J1Q8NGP2 316 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 NTNG2Q96CW9 530 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 HSPBAP1Q96EW2 488 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 ART5Q96L15 291 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 ZNF582Q96NG8 517 aaPredicted RBP8.17□□□□□ -1.1
TDP1-210ENST00000554976 ZNF649Q9BS31 505 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 HOXD1Q9GZZ0 328 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 ENKD1Q9H0I2 346 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 FBXO8Q9NRD0 319 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 RXFP3Q9NSD7 469 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 SLC13A4Q9UKG4 626 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 CDH10Q9Y6N8 788 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 WDFY4Q6ZS81 3184 aa8.17□□□□□ -1.1
TDP1-210ENST00000554976 FRYLO94915 3013 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 J3QRE1 110 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 FADS1O60427 444 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 ZNF354AO60765 605 aaPredicted RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 GABARAPO95166 117 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 UTS2O95399 124 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 DBTP11182 482 aaKnown RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 CD59P13987 128 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 FUT1P19526 365 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 IFNGR2P38484 337 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 FAM198BQ6UWH4 519 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 LYPD8Q6UX82 237 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 BCDIN3DQ7Z5W3 292 aaKnown RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 TMEM163Q8TC26 289 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 COPS4Q9BT78 406 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 FUNDC2Q9BWH2 189 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 AKIRIN1Q9H9L7 192 aaPredicted RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 ATP13A2Q9NQ11 1180 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 FBXO9Q9UK97 447 aaPredicted RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 CFL2Q9Y281 166 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 SIGLEC7Q9Y286 467 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 SLC35A3Q9Y2D2 325 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 B3GALT1Q9Y5Z6 326 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 LOC102723996A0A087X1L8 192 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 C2orf92A0A1B0GVN3 265 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 A0A1W2PQ72 361 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 ICOSLGO75144 302 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 STSP08842 583 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 HBQ1P09105 142 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 ADORA3P0DMS8 318 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 CCKBRP32239 447 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 PPM1FP49593 454 aaPredicted RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 SMSP52788 366 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 PSPHP78330 225 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 FOXD4Q12950 439 aaPredicted RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 MINDY4Q4G0A6 757 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 GPR107Q5VW38 600 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 PTCHD4Q6ZW05 846 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 ZNF550Q7Z398 422 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 SLC46A3Q7Z3Q1 461 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 PPP1R3BQ86XI6 285 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 DAZLQ92904 295 aaKnown RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 TP53INP1Q96A56 240 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 C3orf49Q96BT1 292 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 TRIM2Q9C040 744 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 OR8D2Q9GZM6 311 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 ARMC7Q9H6L4 198 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 WDR54Q9H977 334 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 LIN28AQ9H9Z2 209 aaKnown RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 UBQLN4Q9NRR5 601 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 A0A087WUJ7 227 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 UNC119BA6NIH7 251 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 ALOX12BO75342 701 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 FADS2O95864 444 aaKnown RBP8.16□□□□□ -1.1
TDP1-210ENST00000554976 LCKP06239 509 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 TNNI3P19429 210 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 DLX5P56178 289 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 LPAL2Q16609 132 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 PGGHGQ32M88 737 aa8.16□□□□□ -1.1
TDP1-210ENST00000554976 AADACL4Q5VUY2 407 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms