RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 GPR32P1Q8NGA4 272 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 OR8J1Q8NGP2 316 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 OR9Q1Q8NGQ5 310 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 ZHX1-C8orf76Q96EF9 292 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 PLEKHA8Q96JA3 519 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 SERINC2Q96SA4 455 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 MESP1Q9BRJ9 268 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 FNDC11Q9BVV2 318 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 CDCA4Q9BXL8 241 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 CHRNA10Q9GZZ6 450 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 SLC22A11Q9NSA0 550 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 DHCR7Q9UBM7 475 aaKnown RBP10.25□□□□□ -0.77
SHMT2-216ENST00000554975 GPN3Q9UHW5 284 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-216ENST00000554975 ASB4Q9Y574 426 aa10.25□□□□□ -0.77
SHMT2-216ENST00000554975 ANKRD33BA6NCL7 494 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 SAGE2PA6NJ88 616 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 EFCAB9A8MZ26 197 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 KPNA4O00629 521 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 SOCS6O14544 535 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 B3GALT2O43825 422 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 LCMT2O60294 686 aaKnown RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 ERAL1O75616 437 aaKnown RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 AK1P00568 194 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 IGHEP01854 428 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 ALOX5P09917 674 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 ADORA3P0DMS8 318 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 OR12D1P0DN82 309 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 TNFRSF1BP20333 461 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 ALAS2P22557 587 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 CHMP24386 653 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 MST1P26927 711 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 CERS1P27544 350 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 PRKAR1BP31321 381 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 CA7P43166 264 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 STT3AP46977 705 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 GABRA4P48169 554 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 XKP51811 444 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 VSX2P58304 361 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 RPS26P62854 115 aaKnown RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 AQP6Q13520 282 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 C1DQ13901 141 aaKnown RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 SPCS2Q15005 226 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 DUSP7Q16829 419 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 PRSS53Q2L4Q9 553 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 RGS21Q2M5E4 152 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 AGAP7PQ5VUJ5 663 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 C12orf73Q69YU5 71 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 FCRL6Q6DN72 434 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 NIPAL1Q6NVV3 410 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 LINC00696Q6ZRV3 163 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 PTCHD4Q6ZW05 846 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 C16orf62Q7Z3J2 963 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 LRRC25Q8N386 305 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 OR52J3Q8NH60 311 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 SGCDQ92629 289 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 RAB8BQ92930 207 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 GTPBP3Q969Y2 492 aaKnown RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 AGAP4Q96P64 663 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 TRNT1Q96Q11 434 aaKnown RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 NIPSNAP1Q9BPW8 284 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 ACTRT3Q9BYD9 372 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 PRDM7Q9NQW5 492 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 FAIMQ9NVQ4 179 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 GIN1Q9NXP7 522 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 PTGFRNQ9P2B2 879 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 CFL2Q9Y281 166 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 IFT52Q9Y366 437 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 RPL36Q9Y3U8 105 aaKnown RBP10.24□□□□□ -0.77
SHMT2-216ENST00000554975 KLK4Q9Y5K2 254 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 VPS13CQ709C8 3753 aa10.24□□□□□ -0.77
SHMT2-216ENST00000554975 AIREO43918 545 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 LGI1O95970 557 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 EIF2S1P05198 315 aaKnown RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 EPHA2P29317 976 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 SOX6P35712 828 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 TGFBR2P37173 567 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 MAP2K4P45985 399 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 BMXP51813 675 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 ART1P52961 327 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 CASP9P55211 416 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 DCDP81605 110 aaKnown RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 RHAGQ02094 409 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 PIGFQ07326 219 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 HYAL2Q12891 473 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 IRF3Q14653 427 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 LASP1Q14847 261 aaKnown RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 TRAM2Q15035 370 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 PTGES3Q15185 160 aaKnown RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 FAM214AQ32MH5 1076 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 GPAT3Q53EU6 434 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 TCTE1Q5JU00 501 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 RNLSQ5VYX0 342 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 RHBDD2Q6NTF9 364 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 RPUSD3Q6P087 351 aaKnown RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 CDC73Q6P1J9 531 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 RPTNQ6XPR3 784 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 GDPGP1Q6ZNW5 385 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 Q6ZNX1 250 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 TTLL10Q6ZVT0 673 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms