RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ADAMTSL2Q86TH1 951 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 PLA2G4DQ86XP0 818 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 EFCAB13Q8IY85 973 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LINC00518Q8N0U6 118 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 BATF2Q8N1L9 274 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ABHD12Q8N2K0 398 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF781Q8N8C0 355 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 GPATCH11Q8N954 259 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 UNC13CQ8NB66 2214 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ZNRF1Q8ND25 227 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 OR8H1Q8NGG4 311 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 OR52E1Q8NGJ3 308 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 OR1K1Q8NGR3 316 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 FBXO25Q8TCJ0 367 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SLC13A3Q8WWT9 602 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 RSPH1Q8WYR4 309 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 HIST1H2ACQ93077 130 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 PNPLA2Q96AD5 504 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 C16orf58Q96GQ5 468 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF597Q96LX8 424 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 TMEM237Q96Q45 408 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ATOH8Q96SQ7 321 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CYP2S1Q96SQ9 504 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 COQ7Q99807 217 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 P2RY13Q9BPV8 354 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 JPH2Q9BR39 696 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF577Q9BSK1 485 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 GPR174Q9BXC1 333 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 GCOM2Q9BZD3 368 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 OCR1Q9BZK8 76 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 XPO4Q9C0E2 1151 aaKnown RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 TNMDQ9H2S6 317 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LIME1Q9H400 295 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 NT5DC2Q9H857 520 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 HEXA-AS1Q9H8Q6 139 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 JPT2Q9H910 190 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 PSTPIP2Q9H939 334 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SLC25A19Q9HC21 320 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SYTL2Q9HCH5 934 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 HPS4Q9NQG7 708 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 HOMER3Q9NSC5 361 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 AGPAT5Q9NUQ2 364 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 PAK5Q9P286 719 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 KCNN3Q9UGI6 736 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 RARRES3Q9UL19 164 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 DNPEPQ9ULA0 475 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 MGAT4AQ9UM21 535 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ENTPD4Q9Y227 616 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 PLXND1Q9Y4D7 1925 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ATRQ13535 2644 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CSPG4Q6UVK1 2322 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ERICH2A1L162 156 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ARHGAP42A6NI28 874 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LRRIQ4A6NIV6 560 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CHADO15335 359 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 TSPAN2O60636 221 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SEC22BO75396 215 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 FCER2P06734 321 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 KRT7P08729 469 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 OR9G9P0C7N8 305 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ARF4P18085 180 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ACP1P24666 158 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LMO2P25791 158 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SFNP31947 248 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 P2RY2P41231 377 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 MATKP42679 507 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 TKTL1P51854 596 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF131P52739 623 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 NDST1P52848 882 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 NAPAP54920 295 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 RIPPLY3P57055 190 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 DSCR10P59022 87 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 RPS4XP62701 263 aaKnown RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 RUNX3Q13761 415 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ENPP2Q13822 863 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 EMC2Q15006 297 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 SIX1Q15475 284 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CCDC40Q4G0X9 1142 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CEP55Q53EZ4 464 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LCE3EQ5T5B0 92 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 AGAP7PQ5VUJ5 663 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LIPJQ5W064 366 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 OR6B2Q6IFH4 312 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 RHBDD2Q6NTF9 364 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 STEAP1BQ6NZ63 245 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 NEK5Q6P3R8 708 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 MFSD7Q6UXD7 560 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 WDR88Q6ZMY6 472 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ASRGL1Q7L266 308 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 NUFIP2Q7Z417 695 aaKnown RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 BNIPLQ7Z465 357 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 TAF8Q7Z7C8 310 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 VASH2Q86V25 355 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 RALGPS2Q86X27 583 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 ERICH1Q86X53 443 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 CCDC71Q8IV32 467 aaPredicted RBP1.22□□□□□ -2.21
PRPF39-208ENST00000554785 MFSD6LQ8IWD5 586 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LMNTD2Q8IXW0 634 aa1.22□□□□□ -2.21
PRPF39-208ENST00000554785 LYG1Q8N1E2 194 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms