RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 HCN1O60741 890 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 E2F6O75461 281 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 PPM1BO75688 479 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TRAPPC6AO75865 159 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 SNX4O95219 450 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 CBX7O95931 251 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 IFNA14P01570 189 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TFAP2AP05549 437 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 NAGAP17050 411 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 FPR1P21462 350 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 ACVR2AP27037 513 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 DNAJA1P31689 397 aaKnown RBP11.34□□□□□ -0.59
SHMT2-214ENST00000554604 PPICP45877 212 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 ARHGDIAP52565 204 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 CRYBA2P53672 197 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 DSTNP60981 165 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 SELENOWP63302 87 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TUBA4AP68366 448 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 KCNJ10P78508 379 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 CDK6Q00534 326 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 PLCXD2Q0VAA5 305 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 PMPCAQ10713 525 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TOMM20Q15388 145 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 IQCCQ4KMZ1 466 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 EMC4Q5J8M3 183 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 FOXB2Q5VYV0 432 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TTC23Q5W5X9 447 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 BICRALQ6AI39 1079 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TMEM179BQ7Z7N9 219 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 MCEMP1Q8IX19 187 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 SIMC1Q8NDZ2 872 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TSPAN14Q8NG11 270 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 OR10Q1Q8NGQ4 319 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 OR9A2Q8NGT5 310 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 SPPL2AQ8TCT8 520 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 ZNF675Q8TD23 568 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 ASB5Q8WWX0 329 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 KAT2AQ92830 837 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 C7orf34Q96L11 122 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 PROK2Q9HC23 129 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 A4GALTQ9NPC4 353 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 SIRT3Q9NTG7 399 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-214ENST00000554604 QPCTLQ9NXS2 382 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 ALKBH4Q9NXW9 302 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 ABCG2Q9UNQ0 655 aa11.34□□□□□ -0.59
SHMT2-214ENST00000554604 TRIM64CA6NLI5 447 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 TMEM229AB2RXF0 380 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 WDR1O75083 606 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 TRIM3O75382 744 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-214ENST00000554604 GNAO1P09471 354 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 DRD5P21918 477 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 CHRNB4P30926 498 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 NTSP30990 170 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 KRT20P35900 424 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 CASP3P42574 277 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 EMDP50402 254 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 IST1P53990 364 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 RAD23AP54725 363 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 NR1H2P55055 460 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 PCBP3P57721 371 aaKnown RBP11.33□□□□□ -0.6
SHMT2-214ENST00000554604 VLDLRP98155 873 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 DUSP8Q13202 625 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 CDSNQ15517 529 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 IFI44LQ53G44 452 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 ZNF628Q5EBL2 1059 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 TTC33Q6PID6 262 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-214ENST00000554604 B3GNT6Q6ZMB0 384 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 NUP54Q7Z3B4 507 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 VTCN1Q7Z7D3 282 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 GALNT10Q86SR1 603 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 ZNF555Q8NEP9 628 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 OR5AK3PQ8NH89 298 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 NFKBIDQ8NI38 313 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 NEIL3Q8TAT5 605 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 SFXN5Q8TD22 340 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 LZICQ8WZA0 190 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 MAL2Q969L2 176 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 OMA1Q96E52 524 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 ANGPTL4Q9BY76 406 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 SLC6A15Q9H2J7 730 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 SMURF2Q9HAU4 748 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 ACKR4Q9NPB9 350 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 THUMPD1Q9NXG2 353 aaKnown RBP11.33□□□□□ -0.6
SHMT2-214ENST00000554604 VNN3Q9NY84 501 aa11.33□□□□□ -0.6
SHMT2-214ENST00000554604 MAGED1Q9Y5V3 778 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-214ENST00000554604 FRG2CA6NGY1 282 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 MYO1GB0I1T2 1018 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 hCG_2039718K7EN88 272 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 NME6O75414 186 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-214ENST00000554604 REM1O75628 298 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 PGM3O95394 542 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 HOXD4P09016 255 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-214ENST00000554604 PTGER4P35408 488 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 CDK9P50750 372 aaKnown RBP11.32□□□□□ -0.6
SHMT2-214ENST00000554604 RPS6KA3P51812 740 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 NCBP2P52298 156 aaKnown RBP eCLIP11.32□□□□□ -0.6
SHMT2-214ENST00000554604 NUP107P57740 925 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 IL18R1Q13478 541 aa11.32□□□□□ -0.6
SHMT2-214ENST00000554604 GDF7Q7Z4P5 450 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms