RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 YTHDF3Q7Z739 585 aaKnown RBP5.79□□□□□ -1.48
SCFD1-212ENST00000554486 CALHM3Q86XJ0 350 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 RNF130Q86XS8 419 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 RAB43Q86YS6 212 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 C9orf40Q8IXQ3 194 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 DEFB107AQ8IZN7 70 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 KIF2BQ8N4N8 673 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 HORMAD2Q8N7B1 307 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 TRIML2Q8N7C3 387 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF248Q8NDW4 579 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 OR7G1Q8NGA0 311 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 OR8J3Q8NGG0 315 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 C16orf52Q8NHV5 167 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 MIPOL1Q8TD10 442 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 KCNE4Q8WWG9 221 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 ADIPOR1Q96A54 375 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 MOAP1Q96BY2 351 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 OTUB1Q96FW1 271 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-212ENST00000554486 C16orf58Q96GQ5 468 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 SLC35G5Q96KT7 338 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 ART5Q96L15 291 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 VSTM2LQ96N03 204 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 MS4A4EQ96PG1 132 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 BTBD10Q9BSF8 475 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 SEMA4CQ9C0C4 833 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 C1orf21Q9H246 121 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 KAT8Q9H7Z6 458 aaKnown RBP5.79□□□□□ -1.48
SCFD1-212ENST00000554486 FOLH1BQ9HBA9 442 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF160Q9HCG1 818 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 EQTNQ9NQ60 294 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCFD1-212ENST00000554486 P4HTMQ9NXG6 502 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 TMEM181Q9P2C4 612 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 ABCD2Q9UBJ2 740 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 CD300AQ9UGN4 299 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 BCAP29Q9UHQ4 241 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 PACSIN3Q9UKS6 424 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 ANGPTL2Q9UKU9 493 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 USP22Q9UPT9 525 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 DTX4Q9Y2E6 619 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 HEMK1Q9Y5R4 338 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-212ENST00000554486 NOX1Q9Y5S8 564 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 SNX13Q9Y5W8 968 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 KCNE3Q9Y6H6 103 aa5.79□□□□□ -1.48
SCFD1-212ENST00000554486 DSPP15924 2871 aaKnown RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CELSR3Q9NYQ7 3312 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CACNA1GO43497 2377 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ZZEF1O43149 2961 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 C15orf38-AP3S2A0A0A6YYH1 394 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 NSG1A0A0A6YYJ2 146 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 TRBV11-1A0A0K0K1C0 115 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 PRORSD1PA6NEY8 169 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ERICH4A6NGS2 130 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 OR6C76A6NM76 312 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 EVPLLA8MZ36 301 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 PEX12O00623 359 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 GYG2O15488 501 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 PRAMEF2O60811 474 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CT45A8P0DMV1 189 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CT45A9P0DMV2 189 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 OR12D1P0DN82 309 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 PRKAR1AP10644 381 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ITGAMP11215 1152 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 MATN1P21941 496 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 EIF2S3P41091 472 aaKnown RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 MAGEA8P43361 318 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 RASSF2P50749 326 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 PSG6Q00889 435 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF155Q12901 538 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 RAB32Q13637 225 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 EBPQ15125 230 aaKnown RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 MAPK11Q15759 364 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 EXT1Q16394 746 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 DUSP5Q16690 384 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 BTBD16Q32M84 506 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CT45A2Q5DJT8 189 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ZCCHC12Q6PEW1 402 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 BHLHB9Q6PI77 547 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 TMEM108Q6UXF1 575 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 C16orf47Q6ZP98 133 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 NET1Q7Z628 596 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ARPINQ7Z6K5 226 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 PTOV1Q86YD1 416 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ULK2Q8IYT8 1036 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF441Q8N8Z8 693 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CDRT4Q8N9R6 151 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 OR5D16Q8NGK9 328 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 OR10A6Q8NH74 314 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 FBXO30Q8TB52 745 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 M1APQ8TC57 530 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ELP5Q8TE02 316 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 RAB8BQ92930 207 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 VMP1Q96GC9 406 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF583Q96ND8 569 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 IP6K3Q96PC2 410 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 BTBD9Q96Q07 612 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 OR7D2Q96RA2 312 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CCNL2Q96S94 520 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-212ENST00000554486 CDRT15Q96T59 188 aa5.78□□□□□ -1.48
SCFD1-212ENST00000554486 SH3GL1Q99961 368 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms