RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 MED17Q9NVC6 651 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 KCNN3Q9UGI6 736 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 L3MBTL1Q9Y468 752 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 ZNF175Q9Y473 711 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 DTNAQ9Y4J8 743 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 CSMD1Q96PZ7 3565 aa11.78□□□□□ -0.52
SHMT2-211ENST00000554310 SYT5O00445 386 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 TNFRSF21O75509 655 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 CRHP06850 196 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 UBL4AP11441 157 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 FCGR2AP12318 317 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 ME2P23368 584 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 PSMA4P25789 261 aaKnown RBP11.77□□□□□ -0.53
SHMT2-211ENST00000554310 ELK4P28324 431 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 MRPL19P49406 292 aaKnown RBP11.77□□□□□ -0.53
SHMT2-211ENST00000554310 NUDT2P50583 147 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 P2RX1P51575 399 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 CLDN20P56880 219 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 HPCAP84074 193 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 ZNF141Q15928 474 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 SWT1Q5T5J6 900 aaKnown RBP11.77□□□□□ -0.53
SHMT2-211ENST00000554310 TNFAIP8L2Q6P589 184 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-211ENST00000554310 P4HA3Q7Z4N8 544 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 GGNQ86UU5 652 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 PGAM4Q8N0Y7 254 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 MIER2Q8N344 545 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 METTL25Q8N6Q8 603 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 ZNF614Q8N883 585 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 TOR1AIP2Q8NFQ8 470 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 SMPDL3BQ92485 455 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 CLPTM1LQ96KA5 538 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 ANKRD27Q96NW4 1050 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 PAQR5Q9NXK6 330 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-211ENST00000554310 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-211ENST00000554310 ICAM5Q9UMF0 924 aa11.77□□□□□ -0.53
SHMT2-211ENST00000554310 SPG11Q96JI7 2443 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 SERINC4A6NH21 518 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 CCDC154A6NI56 674 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 SHISA8B8ZZ34 492 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 EEF1E1-BLOC1S5C9J1V9 151 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 GTPBP1O00178 669 aaKnown RBP11.76□□□□□ -0.53
SHMT2-211ENST00000554310 RFXANKO14593 260 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 AIM2O14862 343 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 ZNF264O43296 627 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 EEF1E1O43324 174 aaKnown RBP11.76□□□□□ -0.53
SHMT2-211ENST00000554310 EIF4E2O60573 245 aaKnown RBP11.76□□□□□ -0.53
SHMT2-211ENST00000554310 FKBP6O75344 327 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 TGM6O95932 706 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 LINGO3P0C6S8 592 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 OR12D1P0DN82 309 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 UQCRC1P31930 480 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 MAGEA8P43361 318 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 SUCLG1P53597 346 aaKnown RBP11.76□□□□□ -0.53
SHMT2-211ENST00000554310 DLX5P56178 289 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 CLDN15P56746 228 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 STX1BP61266 288 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 RAC1P63000 192 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 TLE4Q04727 773 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 FOXF2Q12947 444 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 GPR68Q15743 365 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 PDZK1Q5T2W1 519 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 CBLN3Q6UW01 205 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 RNF130Q86XS8 419 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 GCNT2Q8N0V5 402 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 RAB8BQ92930 207 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 ROPN1LQ96C74 230 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 INTS12Q96CB8 462 aaKnown RBP11.76□□□□□ -0.53
SHMT2-211ENST00000554310 RCN3Q96D15 328 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 RNF145Q96MT1 663 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 INPP5KQ9BT40 448 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 PINK1Q9BXM7 581 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 PIGMQ9H3S5 423 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 MCCC2Q9HCC0 563 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 JKAMPQ9P055 326 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 STX18Q9P2W9 335 aaKnown RBP11.76□□□□□ -0.53
SHMT2-211ENST00000554310 CARD8Q9Y2G2 431 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 WDR45Q9Y484 360 aa11.76□□□□□ -0.53
SHMT2-211ENST00000554310 GPC6Q9Y625 555 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-211ENST00000554310 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 H0YC42 278 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 HMGN4O00479 90 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 EIF1AYO14602 144 aaKnown RBP11.75□□□□□ -0.53
SHMT2-211ENST00000554310 OIP5O43482 229 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 FCMRO60667 390 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 UGT2B17O75795 530 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 TNFSF13O75888 250 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 KRT36O76013 467 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 ANP32DO95626 131 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 KRT75O95678 551 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 NUDT14O95848 222 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 CD1EP15812 388 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 ADH6P28332 368 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 CDKN2CP42773 168 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 RNF144AP50876 292 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-211ENST00000554310 POLR2JP52435 117 aaKnown RBP11.75□□□□□ -0.53
SHMT2-211ENST00000554310 CASP9P55211 416 aa11.75□□□□□ -0.53
SHMT2-211ENST00000554310 TPD52P55327 224 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-211ENST00000554310 SORDQ00796 357 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms