RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 LHX6Q9UPM6 363 aa6.13□□□□□ -1.43
LINC00517-202ENST00000554257 MAGED1Q9Y5V3 778 aaPredicted RBP6.13□□□□□ -1.43
LINC00517-202ENST00000554257 TRBV4-1A0A0J9YWV2 114 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 C5orf58C9J3I9 102 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 CIB2O75838 187 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 IL7RP16871 459 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ITGA3P26006 1051 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 CYB561P49447 251 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 TMED10P49755 219 aaKnown RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 UCNP55089 124 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 CTBP2P56545 445 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 LARS2Q15031 903 aaKnown RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 NHSL2Q5HYW2 709 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 HLA-DQA1Q5Y7H0 255 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 BORAQ6PGQ7 559 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SPATA24Q86W54 205 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ADGRG3Q86Y34 549 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 NKAIN4Q8IVV8 208 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 HS3ST5Q8IZT8 346 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 GATSQ8NAP1 163 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF527Q8NB42 609 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 TAAR6Q96RI8 345 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 UBL7Q96S82 380 aaPredicted RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF559Q9BR84 538 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 NMNAT1Q9HAN9 279 aaPredicted RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SACM1LQ9NTJ5 587 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 LRFN1Q9P244 771 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 REV1Q9UBZ9 1251 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ZMIZ1Q9ULJ6 1067 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 PTPRQQ9UMZ3 2332 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 A0A087WUJ7 227 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 A0A1B0GVC2 190 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 A0A1B0GWA3 101 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SH3PXD2BA1X283 911 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 FTCDNL1E5RQL4 147 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SCDO00767 359 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 CLOCKO15516 846 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 IFNA14P01570 189 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 UGT2B15P54855 530 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 LTBQ06643 244 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 C17orf67Q0P5P2 114 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 PIN1Q13526 163 aaPredicted RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 RAPSNQ13702 412 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 RCN1Q15293 331 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF239Q16600 458 aaKnown RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 GLYR1Q49A26 553 aaPredicted RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 FAM98BQ52LJ0 330 aaKnown RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 TBCELQ5QJ74 424 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SWT1Q5T5J6 900 aaKnown RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SLC22A10Q63ZE4 541 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 GGNQ86UU5 652 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 OR5M3Q8NGP4 307 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SLC7A13Q8TCU3 470 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ADAMTS16Q8TE57 1224 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 NRBF2Q96F24 287 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SEPHS2Q99611 448 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 DCLRE1BQ9H816 532 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 MED17Q9NVC6 651 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 HPF1Q9NWY4 346 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 USE1Q9NZ43 259 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 C6orf203Q9P0P8 240 aaPredicted RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 DNAJB9Q9UBS3 223 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 V9GYQ6 96 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 NCOA6Q14686 2063 aaPredicted RBP6.12□□□□□ -1.43
LINC00517-202ENST00000554257 TMEM72A0PK05 275 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SOCS2O14508 198 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 CHP2O43745 196 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SCO2O43819 266 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SLC25A12O75746 678 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SNX4O95219 450 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 CSTAP01040 98 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF17P17021 662 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 DNASE1L1P49184 302 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 CCL11P51671 97 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 C19orf57Q0VDD7 668 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 PRAMEF20Q5VT98 475 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 FBXW10Q5XX13 1052 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 TIGD3Q6B0B8 471 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 OR2T5Q6IEZ7 315 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 CD300LDQ6UXZ3 194 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ASB18Q6ZVZ8 466 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 PLEKHM3Q6ZWE6 761 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 WDFY1Q8IWB7 410 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 ZNF440Q8IYI8 595 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 OR2T29Q8NH02 315 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 B4GALNT2Q8NHY0 566 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SLC26A7Q8TE54 656 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 DUSP19Q8WTR2 217 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 SLC29A1Q99808 456 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 TTTY12Q9BZ98 90 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 FANCFQ9NPI8 374 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 MED11Q9P086 117 aa6.12□□□□□ -1.43
LINC00517-202ENST00000554257 APC2O95996 2303 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 DOCK7Q96N67 2140 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 A0A087WUU8 490 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 PIP5K1CO60331 668 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 F10P00742 488 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 IGHG3P01860 377 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 CELA3AP09093 270 aa6.11□□□□□ -1.43
LINC00517-202ENST00000554257 ATP6V1C1P21283 382 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms