RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 STAC2Q6ZMT1 411 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF704Q6ZNC4 412 aaPredicted RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 SH2D5Q6ZV89 423 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 KCTD20Q7Z5Y7 419 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ISCA2Q86U28 154 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 LAS2Q8IYD9 372 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 UBL4BQ8N7F7 174 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CCDC89Q8N998 374 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 OR7G3Q8NG95 312 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 HUS1BQ8NHY5 278 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 WDR20Q8TBZ3 569 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 DAZLQ92904 295 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 SLC25A28Q96A46 364 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CERS2Q96G23 380 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ADGRG7Q96K78 797 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF681Q96N22 645 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 GAL3ST4Q96RP7 486 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ATOH8Q96SQ7 321 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CCDC77Q9BR77 488 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 C19orf24Q9BVV8 132 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TSPY26PQ9H489 355 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 RPF2Q9H7B2 306 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CXorf21Q9HAI6 301 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CLK4Q9HAZ1 481 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ZBTB26Q9HCK0 441 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TCF7L1Q9HCS4 588 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 LYRM4Q9HD34 91 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TRIM36Q9NQ86 728 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TAS2R13Q9NYV9 303 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 MAT2BQ9NZL9 334 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 NPAP1Q9NZP6 1156 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CNIH4Q9P003 139 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 MTRF1LQ9UGC7 380 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF225Q9UK10 706 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CLEC4AQ9UMR7 237 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 BOKQ9UMX3 212 aaPredicted RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 EXO1Q9UQ84 846 aaKnown RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 CHMP2BQ9UQN3 213 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 LAMP3Q9UQV4 416 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 PLLPQ9Y342 182 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF337Q9Y3M9 751 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 MAGED1Q9Y5V3 778 aaPredicted RBP2.79□□□□□ -1.96
SLIRP-202ENST00000553981 MAD1L1Q9Y6D9 718 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 COMMD10Q9Y6G5 202 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 TEX264Q9Y6I9 313 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 DYSFO75923 2080 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 ROS1P08922 2347 aa2.79□□□□□ -1.96
SLIRP-202ENST00000553981 SONP18583 2426 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 C2orf92A0A1B0GVN3 265 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 DPRXA6NFQ7 191 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 ANKDD1BA6NHY2 528 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 SHISA9B4DS77 424 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 UBXN8O00124 270 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 RAMP1O60894 148 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 GCM2O75603 506 aaPredicted RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CLDN9O95484 217 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 GPR75O95800 540 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 GAS8O95995 478 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 IGKV1D-16P01601 117 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 HIST1H2AGP0C0S8 130 aaPredicted RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CT45A8P0DMV1 189 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CT45A9P0DMV2 189 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 KITP10721 976 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CHN1P15882 459 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 EGR1P18146 543 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 PGAM1P18669 254 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 HIST1H2ADP20671 130 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 IGFBP5P24593 272 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 SERPINB3P29508 390 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 RGS4P49798 205 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 ATP5J2P56134 94 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 GPX6P59796 221 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 STXBP1P61764 594 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 TPM4P67936 248 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 IRX1P78414 480 aaPredicted RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 PPP2R2BQ00005 443 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CDK16Q00536 496 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 DMTNQ08495 405 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 SPOCK1Q08629 439 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 RAB32Q13637 225 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 SERTAD2Q14140 314 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 EFTUD2Q15029 972 aaKnown RBP eCLIP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 TRADDQ15628 312 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 TMEM44Q2T9K0 475 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CT45A2Q5DJT8 189 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 C6orf52Q5T4I8 152 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 KHDRBS2Q5VWX1 349 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 C11orf71Q6IPW1 123 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 FAM45BPQ6NSW5 357 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 TMEM81Q6P7N7 255 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 TRIM40Q6P9F5 258 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CCDC137Q6PK04 289 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 B3GLCTQ6Y288 498 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 NUFIP2Q7Z417 695 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CMC1Q7Z7K0 106 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 GALNT7Q86SF2 657 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 ST13P4Q8IZP2 240 aaPredicted RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 SYCE1Q8N0S2 351 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 LIX1Q8N485 282 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 FADS6Q8N9I5 356 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms