RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 L2HGDHQ9H9P8 463 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 PFDN4Q9NQP4 134 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 SDHAF3Q9NRP4 125 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 FBXO34Q9NWN3 711 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 TAS2R9Q9NYW1 312 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 CISD1Q9NZ45 108 aaKnown RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 GRHL1Q9NZI5 618 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 KLHL13Q9P2N7 655 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 SNX8Q9Y5X2 465 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 NUP214P35658 2090 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 A0A087WZY1 265 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 A0A096LPK6 155 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 A0A1W2PRB8 838 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 MYO1GB0I1T2 1018 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF814B7Z6K7 855 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 ALG1L2C9J202 215 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 UPK1AO00322 258 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 GMFGO60234 142 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 PCDH7O60245 1069 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 LMX1BO60663 402 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 COQ9O75208 318 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 UTS2O95399 124 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SYNGR4O95473 234 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 ADAP00813 363 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 OPN1LWP04000 364 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 CHN1P15882 459 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 TCP1P17987 556 aaKnown RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SRD5A1P18405 259 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 IL32P24001 234 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 EDNRAP25101 427 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 STX2P32856 288 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 MAGEA12P43365 314 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 DSCR9P59020 149 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 MRPS25P82663 173 aaKnown RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 RUNX1T1Q06455 604 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 C17orf67Q0P5P2 114 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 CSTF3Q12996 717 aaKnown RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 NAB1Q13506 487 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 DECR1Q16698 335 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 GRAMD1BQ3KR37 738 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SH2D4BQ5SQS7 431 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 HBMQ6B0K9 141 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 CLEC2AQ6UVW9 174 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 B3GLCTQ6Y288 498 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 TUSC5Q8IXB3 177 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SAMD14Q8IZD0 417 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 OR2L13Q8N349 312 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 C10orf105Q8TEF2 133 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF483Q8TF39 744 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SELENOMQ8WWX9 145 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SLC9A6Q92581 669 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 HTRA1Q92743 480 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 HOXB13Q92826 284 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 KISS1RQ969F8 398 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 ATP6V1E2Q96A05 226 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 ZBTB8AQ96BR9 441 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 PHF21BQ96EK2 531 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 RNF145Q96MT1 663 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 TBL1XR1Q9BZK7 514 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SHCBP1LQ9BZQ2 653 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 TMEM185BQ9H7F4 350 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 MANSC1Q9H8J5 431 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 COQ10BQ9H8M1 238 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 Q9N2J8 555 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 NGBQ9NPG2 151 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SLC35C2Q9NQQ7 365 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 MED17Q9NVC6 651 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 FAIMQ9NVQ4 179 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 SENP1Q9P0U3 644 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 RNF14Q9UBS8 474 aa6.42□□□□□ -1.38
ATXN3-219ENST00000553488 ING1Q9UK53 422 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 C19orf53Q9UNZ5 99 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-219ENST00000553488 GXYLT2A0PJZ3 443 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 VWC2LB2RUY7 222 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 E7EQL1 145 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 CCDC188H7C350 402 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 H7C417 338 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 UBFD1O14562 309 aaKnown RBP6.41□□□□□ -1.38
ATXN3-219ENST00000553488 ABCD4O14678 606 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 EFNA2O43921 213 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 DLX3O60479 287 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 TRIM13O60858 407 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 ESRRBO95718 433 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 OXSR1O95747 527 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-219ENST00000553488 NGFRP08138 427 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 SBK3P0C264 359 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 HSD3B1P14060 373 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 COX5AP20674 150 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 TIA1P31483 386 aaKnown RBP eCLIP6.41□□□□□ -1.38
ATXN3-219ENST00000553488 TTKP33981 857 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 MAP3K8P41279 467 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 HTR6P50406 440 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 SERPINB8P50452 374 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 GUCY2DQ02846 1103 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 SLC18A2Q05940 514 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 SPOCK1Q08629 439 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 ITGADQ13349 1161 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 PPA1Q15181 289 aa6.41□□□□□ -1.38
ATXN3-219ENST00000553488 RNPS1Q15287 305 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms