RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 DNASE1P24855 282 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 UGT2B10P36537 528 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 ANXA11P50995 505 aaKnown RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 CCR4P51679 360 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 CASP9P55211 416 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 NME5P56597 212 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 TXNL4AP83876 142 aaKnown RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 SKP2Q13309 424 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 TOMM34Q15785 309 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 NDUFAF6Q330K2 333 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 SLC25A53Q5H9E4 307 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 NXNQ6DKJ4 435 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 TNFAIP8L2Q6P589 184 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 EIF3MQ7L2H7 374 aaKnown RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF610Q8N9Z0 462 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 GLB1L3Q8NCI6 653 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 RAB8BQ92930 207 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 CPNE4Q96A23 557 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 REXO5Q96IC2 774 aaKnown RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 OR52E6Q96RD3 313 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 PANX1Q96RD7 426 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 FOXC2Q99958 501 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 MED18Q9BUE0 208 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 SAP130Q9H0E3 1048 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 FANCFQ9NPI8 374 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 CCM2LQ9NUG4 571 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF226Q9NYT6 803 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 KCNE5Q9UJ90 142 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 HEATR5AQ86XA9 2040 aa11.6□□□□□ -0.55
ACTN1-207ENST00000553290 CCDC154A6NI56 674 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 KLF11O14901 512 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 KIAA0513O60268 411 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 DNAJA2O60884 412 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 IDO1P14902 403 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 PGCP20142 388 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 IL12AP29459 219 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 SELENBP1Q13228 472 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 QPRTQ15274 297 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 TMEM176BQ3YBM2 270 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-207ENST00000553290 AGBL2Q5U5Z8 902 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 TYW3Q6IPR3 259 aaKnown RBP11.59□□□□□ -0.55
ACTN1-207ENST00000553290 PAMR1Q6UXH9 720 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF619Q8N2I2 560 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 PIWIL2Q8TC59 973 aaKnown RBP11.59□□□□□ -0.55
ACTN1-207ENST00000553290 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 ST8SIA1Q92185 356 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 ROPN1LQ96C74 230 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 MAELQ96JY0 434 aaKnown RBP11.59□□□□□ -0.55
ACTN1-207ENST00000553290 WFIKKN1Q96NZ8 548 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 THUMPD3Q9BV44 507 aaKnown RBP11.59□□□□□ -0.55
ACTN1-207ENST00000553290 CXXC4Q9H2H0 198 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 PLEKHF2Q9H8W4 249 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 CLEC4AQ9UMR7 237 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 SLC35A3Q9Y2D2 325 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 PLEKHA6Q9Y2H5 1048 aa11.59□□□□□ -0.55
ACTN1-207ENST00000553290 MED13LQ71F56 2210 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 CENPVL1A0A0U1RR11 272 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 HMGN4O00479 90 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 CYP7B1O75881 506 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 RAF1P04049 648 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 IL6P05231 212 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 UBTFL6P0CB48 400 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-207ENST00000553290 NID1P14543 1247 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 SHC1P29353 583 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 SLC7A1P30825 629 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 HPCAP84074 193 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 FUT5Q11128 374 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 RNPS1Q15287 305 aaKnown RBP11.58□□□□□ -0.56
ACTN1-207ENST00000553290 POU4F3Q15319 338 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 MAPK14Q16539 360 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 ZNF239Q16600 458 aaKnown RBP11.58□□□□□ -0.56
ACTN1-207ENST00000553290 GSTA3Q16772 222 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 SLC9B1Q4ZJI4 515 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 PDCD4Q53EL6 469 aaKnown RBP11.58□□□□□ -0.56
ACTN1-207ENST00000553290 GPAT3Q53EU6 434 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 FRRS1Q6ZNA5 592 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 ZNF621Q6ZSS3 439 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 BEND4Q6ZU67 534 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 OLIG3Q7RTU3 272 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 STK32CQ86UX6 486 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 FAM71CQ8NEG0 241 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 RNF128Q8TEB7 428 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 TMEM234Q8WY98 164 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 ZNF75CPQ92670 426 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-207ENST00000553290 MBD6Q96DN6 1003 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 KLHL4Q9C0H6 718 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 GP6Q9HCN6 339 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 SERINC1Q9NRX5 453 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-207ENST00000553290 KLHL28Q9NXS3 571 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 LIPT1Q9Y234 373 aa11.58□□□□□ -0.56
ACTN1-207ENST00000553290 MAP1AP78559 2803 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-207ENST00000553290 C9JVG2 144 aa11.57□□□□□ -0.56
ACTN1-207ENST00000553290 SLC22A3O75751 556 aa11.57□□□□□ -0.56
ACTN1-207ENST00000553290 PPP3CBP16298 524 aa11.57□□□□□ -0.56
ACTN1-207ENST00000553290 CRYGSP22914 178 aa11.57□□□□□ -0.56
ACTN1-207ENST00000553290 AGTR1P30556 359 aa11.57□□□□□ -0.56
ACTN1-207ENST00000553290 CCKARP32238 428 aa11.57□□□□□ -0.56
ACTN1-207ENST00000553290 PGM1P36871 562 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms