RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 DUSP21Q9H596 190 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 PTGES3LE9PB15 166 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 ADAM10O14672 748 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 PPM1BO75688 479 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 NBL1P41271 181 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 STAT5AP42229 794 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 SLC35A2P78381 396 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 TEKQ02763 1124 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 PRKCDQ05655 676 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 MARCH3Q86UD3 253 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 IQCF1Q8N6M8 205 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 OR8D4Q8NGM9 314 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 WDR36Q8NI36 951 aaKnown RBP17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF524Q96C55 264 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 HS6ST2Q96MM7 605 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 KLHDC3Q9BQ90 382 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 RHNO1Q9BSD3 238 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 FOXJ2Q9P0K8 574 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 MYOTQ9UBF9 498 aa17.91■□□□□ 0.46
RBFOX1-215ENST00000553186 GTPBP1O00178 669 aaKnown RBP17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 DKK1O94907 266 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 MAKP20794 623 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 RBM34P42696 430 aaKnown RBP17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 BROXQ5VW32 411 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 DNAJA4Q8WW22 397 aaPredicted RBP17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 LAT2Q9GZY6 243 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 KRCC1Q9NPI7 259 aaPredicted RBP17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 ATP13A2Q9NQ11 1180 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 IL20Q9NYY1 176 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 MED31Q9Y3C7 131 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 A0A1W2PQ72 361 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 C17orf51A8MQB3 221 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 EVI2BP34910 448 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 FOLR3P41439 243 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 CTBP2P56545 445 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 COPZ1P61923 177 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF117Q03924 483 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 PIGFQ07326 219 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 GINS1Q14691 196 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 ACSM5Q6NUN0 579 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 TMPRSS11FQ6ZWK6 438 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 C3orf49Q96BT1 292 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 FAM192AQ9GZU8 254 aa17.9■□□□□ 0.46
RBFOX1-215ENST00000553186 KPNA4O00629 521 aaPredicted RBP17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 NDUFB5O43674 189 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 CD63P08962 238 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 IFI30P13284 250 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 TCN2P20062 427 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 MST1P26927 711 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 BTBD16Q32M84 506 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 ZNF620Q6ZNG0 422 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 P3H2Q8IVL5 708 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 SPARTQ8N0X7 666 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 DEFB124Q8NES8 71 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 OR11G2Q8NGC1 345 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 CT55Q8WUE5 264 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 DPH1Q9BZG8 443 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 TBL1XR1Q9BZK7 514 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 SLC25A19Q9HC21 320 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 PLCXD1Q9NUJ7 323 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 SCN3BQ9NY72 215 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 RPS6KB2Q9UBS0 482 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 TPRKBQ9Y3C4 175 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 KNTC1P50748 2209 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 HEATR5AQ86XA9 2040 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 A0A087WUJ7 227 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 SOCS6O14544 535 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 MPZL2O60487 215 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 RAB40ALP0C0E4 278 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 CDK4P11802 303 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 NAGAP17050 411 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 FBXW4P57775 412 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 CSNK2BP67870 215 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 C3orf38Q5JPI3 329 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 PLAG1Q6DJT9 500 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 LYPD8Q6UX82 237 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 PTCHD4Q6ZW05 846 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 KCTD8Q6ZWB6 473 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 MRGPREQ86SM8 312 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 TRUB1Q8WWH5 349 aaKnown RBP17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 TMIGD2Q96BF3 282 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 BPIFA2Q96DR5 249 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 TCFL5Q9UL49 500 aa17.89■□□□□ 0.45
RBFOX1-215ENST00000553186 HCRTR2O43614 444 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 CCR4P51679 360 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 SNRPGP62308 76 aaKnown RBP17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 EFNB1P98172 346 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 EFR3AQ14156 821 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 WBP2NLQ6ICG8 309 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 TMCO5AQ8N6Q1 288 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 CLDN22Q8N7P3 220 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 TEX47Q8TBZ9 253 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 HGDQ93099 445 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 SH3YL1Q96HL8 342 aaPredicted RBP17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 IL4I1Q96RQ9 567 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 NODALQ96S42 347 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 ICAM5Q9UMF0 924 aa17.88■□□□□ 0.45
RBFOX1-215ENST00000553186 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.87■□□□□ 0.45
RBFOX1-215ENST00000553186 SMIM31A0A1B0GVY4 71 aa17.87■□□□□ 0.45
RBFOX1-215ENST00000553186 FAM20BO75063 409 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms