RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 OR1Q1Q15612 314 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 COL28A1Q2UY09 1125 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 ZNF766Q5HY98 468 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 ENTPD8Q5MY95 495 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 BICRALQ6AI39 1079 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 WBP2NLQ6ICG8 309 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 ULK3Q6PHR2 472 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 RBM45Q8IUH3 476 aaKnown RBP8.71□□□□□ -1.02
LIMA1-211ENST00000552338 SULF2Q8IWU5 870 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 LILRA2Q8N149 483 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 PQLC1Q8N2U9 271 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 RBMXL3Q8N7X1 1067 aaKnown RBP8.71□□□□□ -1.02
LIMA1-211ENST00000552338 ZNF614Q8N883 585 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 OR4C15Q8NGM1 316 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 OR5M3Q8NGP4 307 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 OR10Q1Q8NGQ4 319 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 OR1J4Q8NGS1 313 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 ADAMTS16Q8TE57 1224 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 PYDC1Q8WXC3 89 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 TMEM234Q8WY98 164 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 STMN2Q93045 179 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 ZNF524Q96C55 264 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 ABHD17AQ96GS6 310 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 CENPNQ96H22 339 aaPredicted RBP8.71□□□□□ -1.02
LIMA1-211ENST00000552338 EPYCQ99645 322 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 PIP5K1AQ99755 562 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 PRSS27Q9BQR3 290 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 BDH2Q9BUT1 245 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 OSBPL10Q9BXB5 764 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 PTGES2Q9H7Z7 377 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 RNPEPL1Q9HAU8 725 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 NTN4Q9HB63 628 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 GALNT9Q9HCQ5 603 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 MAN2C1Q9NTJ4 1040 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 WDR70Q9NW82 654 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 PLA2G3Q9NZ20 509 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 PPP4R1LQ9P1A2 415 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 RIMS3Q9UJD0 308 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 ZMIZ1Q9ULJ6 1067 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 BOKQ9UMX3 212 aaPredicted RBP8.71□□□□□ -1.02
LIMA1-211ENST00000552338 AURKCQ9UQB9 309 aa8.71□□□□□ -1.02
LIMA1-211ENST00000552338 CEP295Q9C0D2 2601 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 DMXL2Q8TDJ6 3036 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 A0A087WUJ7 227 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 TRAPPC13A5PLN9 417 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 H0YHG0 523 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 LINC01387J3KSC0 135 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 SCO2O43819 266 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 PEX1O43933 1283 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 ZIC3O60481 467 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 CST1P01037 141 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 PDGFAP04085 211 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 HPNP05981 417 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 GKN3PP0CG01 181 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 SFTPCP11686 197 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 PRG2P13727 222 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 UQCRBP14927 111 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 PRKCAP17252 672 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 TNFRSF1BP20333 461 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 MST1P26927 711 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 IFNA8P32881 189 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 EIF1P41567 113 aaKnown RBP8.7□□□□□ -1.02
LIMA1-211ENST00000552338 RBM34P42696 430 aaKnown RBP8.7□□□□□ -1.02
LIMA1-211ENST00000552338 CXADRP78310 365 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 PLPPR5Q32ZL2 321 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 COLEC12Q5KU26 742 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 PRAMEF20Q5VT98 475 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 HMBOX1Q6NT76 420 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 GRINAQ7Z429 371 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 HMGN2P46Q86SG4 172 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 ATG4DQ86TL0 474 aaPredicted RBP8.7□□□□□ -1.02
LIMA1-211ENST00000552338 CYP4Z1Q86W10 505 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 RNF113BQ8IZP6 322 aaKnown RBP8.7□□□□□ -1.02
LIMA1-211ENST00000552338 LINC00471Q8N535 108 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 CATSPER1Q8NEC5 780 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 ZBTB8AQ96BR9 441 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 C3orf49Q96BT1 292 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 C1GALT1C1Q96EU7 318 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 MRGPRX4Q96LA9 322 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 ZNF597Q96LX8 424 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 C5orf34Q96MH7 638 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 HS6ST2Q96MM7 605 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 SLC19A3Q9BZV2 496 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 OR2B2Q9GZK3 357 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 ZDHHC11Q9H8X9 412 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 NMNAT1Q9HAN9 279 aaPredicted RBP8.7□□□□□ -1.02
LIMA1-211ENST00000552338 TMEM27Q9HBJ8 222 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 ACKR4Q9NPB9 350 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 ANKRD10Q9NXR5 420 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 TAS2R10Q9NYW0 307 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 C15orf41Q9Y2V0 281 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 FAM32AQ9Y421 112 aaKnown RBP8.7□□□□□ -1.02
LIMA1-211ENST00000552338 HRH3Q9Y5N1 445 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 LYVE1Q9Y5Y7 322 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 IGF2RP11717 2491 aa8.7□□□□□ -1.02
LIMA1-211ENST00000552338 DNAJC13O75165 2243 aa8.69□□□□□ -1.02
LIMA1-211ENST00000552338 A0A1B0GWA3 101 aa8.69□□□□□ -1.02
LIMA1-211ENST00000552338 PINLYPA6NC86 204 aa8.69□□□□□ -1.02
LIMA1-211ENST00000552338 J3KTA2 159 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms