RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 RBPJQ06330 500 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 C2orf80Q0P641 193 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 PDE7AQ13946 482 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 SQLEQ14534 574 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 PTGR1Q14914 329 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 GKAP1Q5VSY0 366 aaPredicted RBP5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 AGAP7PQ5VUJ5 663 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 MLIPQ5VWP3 458 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 C18orf63Q68DL7 685 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 OR52E8Q6IFG1 317 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 SLC48A1Q6P1K1 146 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 LINC00696Q6ZRV3 163 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 R3HCC1LQ7Z5L2 792 aaKnown RBP5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 SAMD14Q8IZD0 417 aaPredicted RBP5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 NATD1Q8N6N6 113 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 FAM47BQ8NA70 645 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 PLPP5Q8NEB5 264 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 OR2Y1Q8NGV0 311 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 LILRB4Q8NHJ6 448 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 ROBO4Q8WZ75 1007 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 RFKQ969G6 155 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 TESCQ96BS2 214 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 AGAP4Q96P64 663 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 TSSK3Q96PN8 268 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 CSF3RQ99062 836 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 DPY30Q9C005 99 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 FAM107BQ9H098 131 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 RABEP2Q9H5N1 569 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 PLEKHF2Q9H8W4 249 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 MIEF1Q9NQG6 463 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 STMN3Q9NZ72 180 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 ZIM2Q9NZV7 527 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 HEY2Q9UBP5 337 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 BAIAP2L1Q9UHR4 511 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 ATP6V1HQ9UI12 483 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 PSME2Q9UL46 239 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 PADI2Q9Y2J8 665 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 ARL2BPQ9Y2Y0 163 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 MMACHCQ9Y4U1 282 aa5.9□□□□□ -1.46
DEPDC4-210ENST00000551642 DSCAMO60469 2012 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 A0A1W2PQ72 361 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 CGB1A6NKQ9 187 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 LINC00473A8K010 186 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 GABRR3A8MPY1 467 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 IDSB3KWA1 339 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 NDUFAB1O14561 156 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 SCAMP2O15127 329 aaKnown RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 PGRMC2O15173 223 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 SLC22A2O15244 555 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 CCDC22O60826 627 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 SLC22A3O75751 556 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 DCTN3O75935 186 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 GPR75O95800 540 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 IGHEP01854 428 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 HEXBP07686 556 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 UMODP07911 640 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 NCF2P19878 526 aaPredicted RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 GPX3P22352 226 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 GALNSP34059 522 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 FRKP42685 505 aaPredicted RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 TNFSF10P50591 281 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 HNRNPFP52597 415 aaKnown RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 EFNA3P52797 238 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 CLNS1AP54105 237 aaKnown RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 STX1BP61266 288 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 UFM1P61960 85 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 BTG2P78543 158 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 RHAGQ02094 409 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 ACTN3Q08043 901 aaPredicted RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 SLC13A2Q13183 592 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 SERTAD2Q14140 314 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 RPS6KA2Q15349 733 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 INAQ16352 499 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 TMEM205Q6UW68 189 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 PSD4Q8NDX1 1056 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 OR4K14Q8NGD5 310 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 OR8J2Q8NGG1 315 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 GOT1L1Q8NHS2 421 aaPredicted RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 CLHC1Q8NHS4 586 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 CDC26Q8NHZ8 85 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 BCAS4Q8TDM0 211 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 ANKRD9Q96BM1 317 aaPredicted RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 COQ8BQ96D53 544 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 MARK4Q96L34 752 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 TEX37Q96LM6 180 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 ZNF681Q96N22 645 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 PRPF18Q99633 342 aaKnown RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 C1orf43Q9BWL3 253 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 VN1R1Q9GZP7 353 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 MYLK2Q9H1R3 596 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 TCF7L1Q9HCS4 588 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 SLC35C2Q9NQQ7 365 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 SAR1AQ9NR31 198 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 PRTFDC1Q9NRG1 225 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 ATAD3AQ9NVI7 634 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 BEX4Q9NWD9 120 aaPredicted RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 ARMCX1Q9P291 453 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 RNF6Q9Y252 685 aa5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 PTRH2Q9Y3E5 179 aaKnown RBP5.89□□□□□ -1.47
DEPDC4-210ENST00000551642 CLDN16Q9Y5I7 305 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms