RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HKDC1Q2TB90 917 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 DNAJC21Q5F1R6 531 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 XKR6Q5GH73 641 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CTSL3PQ5NE16 218 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ACER2Q5QJU3 275 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 RNASEH2BQ5TBB1 312 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 MLIPQ5VWP3 458 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 LYPLAL1Q5VWZ2 237 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 PPP1R2P3Q6NXS1 205 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 GTF2H2CQ6P1K8 395 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 PRMT9Q6P2P2 845 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CYB5D1Q6P9G0 228 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 SHQ1Q6PI26 577 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 C11orf88Q6PI97 169 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 LANCL3Q6ZV70 420 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 NDUFAF7Q7L592 441 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 DET1Q7L5Y6 550 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 C1QL2Q7Z5L3 287 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 RAB43Q86YS6 212 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CRLF3Q8IUI8 442 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM139Q8IV31 216 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF595Q8IYB9 648 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 KATNAL2Q8IYT4 538 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 C1orf87Q8N0U7 546 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 GBGT1Q8N5D6 347 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CPSF7Q8N684 471 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 RELL2Q8NC24 303 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF114Q8NC26 417 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 NEK11Q8NG66 645 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 OR52I2Q8NH67 350 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 MOSPD2Q8NHP6 518 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 GOT1L1Q8NHS2 421 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 FAM57AQ8TBR7 257 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ACTL9Q8TC94 416 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 AGAP11Q8TF27 550 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM255BQ8WV15 326 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 RNF138Q8WVD3 245 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ABTB1Q969K4 478 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.12□□□□□ -2.071e-6■■■■■ 31.4
CPSF6-207ENST00000551516 FAM162AQ96A26 154 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 PHF21BQ96EK2 531 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ADGRG7Q96K78 797 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF48Q96MX3 618 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 SFXN2Q96NB2 322 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 OR4K3Q96R72 315 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 VAT1Q99536 393 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 COPS8Q99627 209 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 APOL2Q9BQE5 337 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM204Q9BSN7 226 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 THUMPD3Q9BV44 507 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 CARD6Q9BX69 1037 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ILKAPQ9H0C8 392 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 WNT5BQ9H1J7 359 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 FAM96AQ9H5X1 160 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ASB8Q9H765 288 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 UBTD1Q9HAC8 227 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF160Q9HCG1 818 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 MRPL47Q9HD33 250 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 AGPAT4Q9NRZ5 378 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ARGLU1Q9NWB6 273 aaPredicted RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF224Q9NZL3 707 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 KCNN3Q9UGI6 736 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 HOOK1Q9UJC3 728 aaKnown RBP2.12□□□□□ -2.07
CPSF6-207ENST00000551516 IKZF3Q9UKT9 509 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 KCNS2Q9ULS6 477 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 RNF6Q9Y252 685 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 HYOU1Q9Y4L1 999 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.12□□□□□ -2.072e-7■■□□□ 13
CPSF6-207ENST00000551516 PRR14LQ5THK1 2151 aa2.12□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF407Q9C0G0 2248 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 NBEAL2Q6ZNJ1 2754 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 DOCK7Q96N67 2140 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 TRAV34A0A0B4J273 112 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 IGHV3-20A0A0C4DH32 117 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 A0A1B0GTH9 108 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 ZCWPW2A0A1B0GU75 182 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 CTAGE9A4FU28 777 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 NKX2-6A6NCS4 301 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 ANXA2P2A6NMY6 339 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 HACD1B0YJ81 288 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 HNRNPCL2B2RXH8 293 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM178BH3BS89 294 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 APOC4-APOC2K7ER74 178 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 CLDN4O14493 209 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 GPR137BO60478 399 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 WDR1O75083 606 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 PSIP1O75475 530 aaKnown RBP2.11□□□□□ -2.07
CPSF6-207ENST00000551516 NSA2O95478 260 aaKnown RBP2.11□□□□□ -2.07
CPSF6-207ENST00000551516 NADKO95544 446 aaPredicted RBP2.11□□□□□ -2.07
CPSF6-207ENST00000551516 F10P00742 488 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 APOC2P02655 101 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 CLPSP04118 112 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 ALPPP05187 535 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 IGKV2-30P06310 120 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 H1F0P07305 194 aaKnown RBP2.11□□□□□ -2.07
CPSF6-207ENST00000551516 SP1P08047 785 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 ACAA1P09110 424 aaPredicted RBP2.11□□□□□ -2.07
CPSF6-207ENST00000551516 OR2T7P0C7T2 308 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 DANCRP0C864 163 aa2.11□□□□□ -2.07
CPSF6-207ENST00000551516 CTAGE8P0CG41 777 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms