RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 ABCD4O14678 606 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 LSM1O15116 133 aaKnown RBP13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 HSPA4LO95757 839 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 FESP07332 822 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 BCKDHAP12694 445 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 CPA3P15088 417 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 IGHV1-2P23083 117 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 OR3A2P47893 321 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 RAC3P60763 192 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 NAA20P61599 178 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 IRX1P78414 480 aaPredicted RBP13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 RASGEF1BQ0VAM2 473 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 CHRFAM7AQ494W8 412 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 Q6ZT83 130 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 SLC43A2Q8N370 569 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 ZNF75CPQ92670 426 aaPredicted RBP13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 HTRA1Q92743 480 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 RHNO1Q9BSD3 238 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 BCO1Q9HAY6 547 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 DUSP22Q9NRW4 184 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 KLHL9Q9P2J3 617 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 ACTL7BQ9Y614 415 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 CADP27708 2225 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 A0A096LNT2 108 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 FAM234BA2RU67 622 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 SMAD9O15198 467 aaKnown RBP13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 H6PDO95479 791 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 LAMP1P11279 417 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 SLC7A1P30825 629 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 ATP12AP54707 1039 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 CDH11P55287 796 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 SUMO3P55854 103 aaPredicted RBP13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 QPRTQ15274 297 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 CCDC153Q494R4 210 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 DCST2Q5T1A1 773 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 LIPMQ5VYY2 423 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 ALPK2Q86TB3 2170 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 C10orf107Q8IVU9 208 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 ZNF527Q8NB42 609 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 ADAMTS15Q8TE58 950 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 TMEM158Q8WZ71 300 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 MRGPRX4Q96LA9 322 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 OR5B2Q96R09 309 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 GATA5Q9BWX5 397 aaPredicted RBP13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 TXLNGYQ9BZA5 131 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 HOXD1Q9GZZ0 328 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 QRSL1Q9H0R6 528 aaKnown RBP13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 BARX1Q9HBU1 254 aaPredicted RBP13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 ATP6V1HQ9UI12 483 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 DNAJC15Q9Y5T4 150 aa13.08□□□□□ -0.31
TMEM106C-216ENST00000551305 ESPNB1AK53 854 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 TMEM233B4DJY2 109 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 E7EQL1 145 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 NPIPB9F8W1W9 429 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 H3BNH8 94 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 KIF2AO00139 706 aaPredicted RBP13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 PHF1O43189 567 aaPredicted RBP13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 CYTIPO60759 359 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 IGHV3-9P01782 118 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 SHBGP04278 402 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 CRHR1P34998 444 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 CCT3P49368 545 aaKnown RBP13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 CCR4P51679 360 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 SPOCK1Q08629 439 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 SELENBP1Q13228 472 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 TP53BP2Q13625 1128 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 MLC1Q15049 377 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 KANK2Q63ZY3 851 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 R3HCC1LQ7Z5L2 792 aaKnown RBP13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 DDIASQ8IXT1 998 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 TMCO5AQ8N6Q1 288 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 OR10H5Q8NGA6 315 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 OR5W2Q8NH69 310 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 MUCL1Q96DR8 90 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 MTERF3Q96E29 417 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 CACNG6Q9BXT2 260 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 ACTRT3Q9BYD9 372 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 GRIP2Q9C0E4 1043 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 GPATCH2Q9NW75 528 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 DTNAQ9Y4J8 743 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 A0A1W2PR80 420 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 SCAMP2O15127 329 aaKnown RBP13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 ZNF264O43296 627 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 PGM3O95394 542 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 C6orf47O95873 294 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 NEFHP12036 1026 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 GGT1P19440 569 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 ASMTP46597 345 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 CCT5P48643 541 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 NUDT6P53370 316 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 TMEM249Q2WGJ8 235 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 TIGD2Q4W5G0 525 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 SLC25A53Q5H9E4 307 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 TIMM23BQ5SRD1 257 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 C6orf52Q5T4I8 152 aa13.07□□□□□ -0.32
TMEM106C-216ENST00000551305 AGAP6Q5VW22 663 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms