RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FOXC2Q99958 501 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 QRSL1Q9H0R6 528 aaKnown RBP11.64□□□□□ -0.55
NPAS3-209ENST00000551008 HHATLQ9HCP6 504 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 THAP1Q9NVV9 213 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 KLHL28Q9NXS3 571 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 BTNL2Q9UIR0 455 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 ING1Q9UK53 422 aaPredicted RBP11.64□□□□□ -0.55
NPAS3-209ENST00000551008 NF1P21359 2839 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 CLDN24A6NM45 220 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 ZNF264O43296 627 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 EIF4E2O60573 245 aaKnown RBP11.63□□□□□ -0.55
NPAS3-209ENST00000551008 STX11O75558 287 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 SOX30O94993 753 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 ATE1O95260 518 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 AK1P00568 194 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 THBDP07204 575 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 GUSBP08236 651 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 KITP10721 976 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 FCGR2AP12318 317 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 ADH6P28332 368 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 AGTR1P30556 359 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 S100A3P33764 101 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 PGM1P36871 562 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 EIF1P41567 113 aaKnown RBP11.63□□□□□ -0.55
NPAS3-209ENST00000551008 MVDP53602 400 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 CLNS1AP54105 237 aaKnown RBP11.63□□□□□ -0.55
NPAS3-209ENST00000551008 FGFBP1Q14512 234 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 QPRTQ15274 297 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 DPY19L1Q2PZI1 675 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 COX20Q5RI15 118 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 ANXA8L1Q5VT79 327 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 BHLHB9Q6PI77 547 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 SPATA19Q7Z5L4 167 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 KRTAP1-3Q8IUG1 177 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 KIRREL3Q8IZU9 778 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 OR6K3Q8NGY3 331 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 OR5W2Q8NH69 310 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 RFWD2Q8NHY2 731 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 RAB3IL1Q8TBN0 382 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 OSTF1Q92882 214 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 ROPN1LQ96C74 230 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 GMPPAQ96IJ6 420 aaPredicted RBP11.63□□□□□ -0.55
NPAS3-209ENST00000551008 HS3ST6Q96QI5 342 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 SLC35A5Q9BS91 424 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 LAT2Q9GZY6 243 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 SLC38A1Q9H2H9 487 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 PLSCR4Q9NRQ2 329 aa11.63□□□□□ -0.55
NPAS3-209ENST00000551008 C6orf203Q9P0P8 240 aaPredicted RBP11.63□□□□□ -0.55
NPAS3-209ENST00000551008 GPC6Q9Y625 555 aaPredicted RBP11.63□□□□□ -0.55
NPAS3-209ENST00000551008 ZFHX3Q15911 3703 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 A0A1W2PNR3 127 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 CCDC154A6NI56 674 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 DUXAA6NLW8 204 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 GOSR1O95249 250 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 GSNP06396 782 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 PGRP06401 933 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 CHRM4P08173 479 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 POU2F1P14859 743 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 CRYGSP22914 178 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 EDNRAP25101 427 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 CHRNEQ04844 493 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 STAC2Q6ZMT1 411 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 RNF130Q86XS8 419 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 ANKFN1Q8N957 763 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 TOR1AIP2Q8NFQ8 470 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 OR9I1Q8NGQ6 314 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 XAGE5Q8WWM1 108 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 MBD6Q96DN6 1003 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 MRGPRX4Q96LA9 322 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 THUMPD3Q9BV44 507 aaKnown RBP11.62□□□□□ -0.55
NPAS3-209ENST00000551008 MANSC1Q9H8J5 431 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 ELOVL5Q9NYP7 299 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 PROCRQ9UNN8 238 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 WDR45Q9Y484 360 aa11.62□□□□□ -0.55
NPAS3-209ENST00000551008 IGHV3-15A0A0B4J1V0 119 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 H3BNH8 94 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 GTPBP1O00178 669 aaKnown RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 KLF11O14901 512 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 NUDT14O95848 222 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 CSTAP01040 98 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 UBTFL6P0CB48 400 aaPredicted RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 CD1EP15812 388 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 HOXB9P17482 250 aaPredicted RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 CD53P19397 219 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 RPS4Y1P22090 263 aaKnown RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 ENPP1P22413 925 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 ME2P23368 584 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 KHKP50053 298 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 CCR4P51679 360 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 CARD18P57730 90 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 SESN3P58005 492 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 SELENBP1Q13228 472 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 SYPL1Q16563 259 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 TMEM176BQ3YBM2 270 aaPredicted RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 GTDC1Q4AE62 458 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 PDCD4Q53EL6 469 aaKnown RBP11.61□□□□□ -0.55
NPAS3-209ENST00000551008 TTMPQ5BVD1 217 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 ANKRD34AQ69YU3 496 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 PPP4R4Q6NUP7 873 aa11.61□□□□□ -0.55
NPAS3-209ENST00000551008 C16orf62Q7Z3J2 963 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms