RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TOMM20Q15388 145 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 NPTX1Q15818 432 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 IGFBP7Q16270 282 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 NRF1Q16656 503 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 ZSWIM7Q19AV6 140 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 GLYR1Q49A26 553 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-206ENST00000550406 LRRC23Q53EV4 343 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-206ENST00000550406 KRTCAP3Q53RY4 240 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 DCST1Q5T197 706 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 CCDC121Q6ZUS5 278 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 RBM45Q8IUH3 476 aaKnown RBP11.81□□□□□ -0.52
RAB5C-206ENST00000550406 TNIP2Q8NFZ5 429 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 NEIL3Q8TAT5 605 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 GORASP2Q9H8Y8 452 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 HHATLQ9HCP6 504 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 TNFRSF10DQ9UBN6 386 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 DKKL1Q9UK85 242 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 KIAA1549Q9HCM3 1950 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 KALRNO60229 2985 aa11.81□□□□□ -0.52
RAB5C-206ENST00000550406 ARHGAP21Q5T5U3 1957 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 A0A087WZY1 265 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 A0A1B0GTH9 108 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 OR2M5A3KFT3 312 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 CFAP73A6NFT4 308 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 M0R3H8 397 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 FAAHO00519 579 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 ARPC2O15144 300 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 SUSD5O60279 629 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 HCN1O60741 890 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 SERPINA1P01009 418 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 C8BP07358 591 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 PRKCAP17252 672 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 BMP7P18075 431 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 TNFRSF1BP20333 461 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 IL11P20809 199 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 ATP6V1B2P21281 511 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 HTR2AP28223 471 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 IDH2P48735 452 aaKnown RBP11.8□□□□□ -0.52
RAB5C-206ENST00000550406 STARP49675 285 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 CCR4P51679 360 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 SESN3P58005 492 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 GABPB1Q06547 395 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-206ENST00000550406 FOXF1Q12946 379 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 ELOAQ14241 798 aaKnown RBP11.8□□□□□ -0.52
RAB5C-206ENST00000550406 DNAL1Q4LDG9 190 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 ASRGL1Q7L266 308 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 PRICKLE2Q7Z3G6 844 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 VTCN1Q7Z7D3 282 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 TSPYL5Q86VY4 417 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-206ENST00000550406 ZNF440Q8IYI8 595 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 ST6GALNAC3Q8NDV1 305 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 BHLHE22Q8NFJ8 381 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-206ENST00000550406 OR14L1PQ8NHC6 308 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 SLC26A7Q8TE54 656 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 SLC35B4Q969S0 331 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 LRMDAQ9H2I8 198 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 ACER3Q9NUN7 267 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 DCAF13Q9NV06 445 aaKnown RBP11.8□□□□□ -0.52
RAB5C-206ENST00000550406 ZNF337Q9Y3M9 751 aa11.8□□□□□ -0.52
RAB5C-206ENST00000550406 SPTA1P02549 2419 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 CFAP46Q8IYW2 2715 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 C7orf72A4D263 438 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 EIF4E1BA6NMX2 242 aaKnown RBP11.79□□□□□ -0.52
RAB5C-206ENST00000550406 AQP7O14520 342 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 ACOT8O14734 319 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 SEMA7AO75326 666 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 NUDT14O95848 222 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 PGCP20142 388 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 SLC6A8P48029 635 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 CLDN15P56746 228 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 CRYZQ08257 329 aaKnown RBP11.79□□□□□ -0.52
RAB5C-206ENST00000550406 TRIM25Q14258 630 aaKnown RBP11.79□□□□□ -0.52
RAB5C-206ENST00000550406 NHSL2Q5HYW2 709 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 VASNQ6EMK4 673 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 ZNF550Q7Z398 422 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 TSEN54Q7Z6J9 526 aaKnown RBP11.79□□□□□ -0.52
RAB5C-206ENST00000550406 GHDCQ8N2G8 530 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 GTPBP8Q8N3Z3 284 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-206ENST00000550406 FAM86B1Q8N7N1 296 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 OR52E4Q8NGH9 312 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 OR6T1Q8NGN1 323 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 FAM162AQ96A26 154 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 RNF145Q96MT1 663 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 TIMP4Q99727 224 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 UGT2B28Q9BY64 529 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 ADAM19Q9H013 955 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 ARMC7Q9H6L4 198 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 LDAHQ9H6V9 325 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 CACYBPQ9HB71 228 aaKnown RBP11.79□□□□□ -0.52
RAB5C-206ENST00000550406 ZNF835Q9Y2P0 537 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 SNX13Q9Y5W8 968 aa11.79□□□□□ -0.52
RAB5C-206ENST00000550406 TCRBV5S2A0A599 114 aa11.78□□□□□ -0.52
RAB5C-206ENST00000550406 IFNA14P01570 189 aa11.78□□□□□ -0.52
RAB5C-206ENST00000550406 CHMP24386 653 aa11.78□□□□□ -0.52
RAB5C-206ENST00000550406 SHC1P29353 583 aa11.78□□□□□ -0.52
RAB5C-206ENST00000550406 OR1E2P47887 323 aa11.78□□□□□ -0.52
RAB5C-206ENST00000550406 LHX2P50458 406 aa11.78□□□□□ -0.52
RAB5C-206ENST00000550406 RASSF2P50749 326 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms