RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TRIM31Q9BZY9 425 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 YARS2Q9Y2Z4 477 aaKnown RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 UGT2A1Q9Y4X1 527 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TBC1D3EA0A087X179 549 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SMIM31A0A1B0GVY4 71 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 C9orf172C9J069 976 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CLIC1O00299 241 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CTDSPLO15194 276 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CLOCKO15516 846 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 OGG1O15527 345 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 KCNK2O95069 426 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 BAG2O95816 211 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ANXA4P09525 319 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ST6GAL1P15907 406 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SRD5A2P31213 254 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CASP9P55211 416 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SSBP1Q04837 148 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 LIPEQ05469 1076 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CTU2Q2VPK5 515 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CPEB2Q7Z5Q1 589 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 C9orf40Q8IXQ3 194 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 POMGNT2Q8NAT1 580 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 GPR119Q8TDV5 335 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SMPDL3BQ92485 455 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 DAZLQ92904 295 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 LRRC46Q96FV0 321 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 NPAS2Q99743 824 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 OPA3Q9H6K4 179 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ARMC7Q9H6L4 198 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 MOB1AQ9H8S9 216 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 POLR1BQ9H9Y6 1135 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SNTG1Q9NSN8 517 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM74BQ9NUR3 256 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 EXD2Q9NVH0 621 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 DIMT1Q9UNQ2 313 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ANKDD1BA6NHY2 528 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SMIM23A6NLE4 172 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 H3BNH8 94 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 VAMP5O95183 116 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 PLGP00747 810 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 GLAP06280 429 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 TPOP07202 933 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 IL3P08700 152 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CELA3BP08861 270 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 EVX1P49640 407 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 P2RX1P51575 399 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 TDGF1P3P51864 188 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ARF1P84077 181 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 DUSP2Q05923 314 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ACSM2AQ08AH3 577 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 AIMP2Q13155 320 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 MAPKAPK3Q16644 382 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ACSM2BQ68CK6 577 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 DPY19L2P2Q6ZN68 376 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 RTL4Q6ZR62 310 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CROCCP3Q8IVE0 287 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CTAGE3PQ8IX95 158 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CLDN19Q8N6F1 224 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SLC38A5Q8WUX1 472 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 GTPBP3Q969Y2 492 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF304Q9HCX3 659 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SLC6A13Q9NSD5 602 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 GLTPQ9NZD2 209 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 IL36GQ9NZH8 169 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SH3BP4Q9P0V3 963 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ATG4BQ9Y4P1 393 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 LNP1A1A4G5 178 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 STX11O75558 287 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF432O94892 652 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CHRM4P08173 479 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 INHBBP09529 407 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CSF1P09603 554 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF888P0CJ79 500 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 LAMP1P11279 417 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CNR1P21554 472 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 PLA2G5P39877 138 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CDKN2CP42773 168 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CPA2P48052 419 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 PREPP48147 710 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 TMBIM6P55061 237 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 RBBP5Q15291 538 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 DHFR2Q86XF0 187 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 OR2M3Q8NG83 312 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 FAM81AQ8TBF8 368 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 APH1BQ8WW43 257 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 GTF3AQ92664 365 aaKnown RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 TRIB1Q96RU8 372 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 CCDC3Q9BQI4 270 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 GPR174Q9BXC1 333 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 IKZF5Q9H5V7 419 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 EXO5Q9H790 373 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 FAM60AQ9NP50 221 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 MYOZ1Q9NP98 299 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-212ENST00000549162 SACM1LQ9NTJ5 587 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 KCNE5Q9UJ90 142 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF580Q9UK33 172 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 RASD1Q9Y272 281 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 DOCK9Q9BZ29 2069 aa4.44□□□□□ -1.7
SCAF11-212ENST00000549162 A0A075B6Q4 140 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 IQCF5A8MTL0 148 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms