RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 NUP43Q8NFH3 380 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR5J2Q8NH18 312 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 OR5K2Q8NHB8 316 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 SP7Q8TDD2 431 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 PIGKQ92643 395 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 GCDHQ92947 438 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 TCEAL4Q96EI5 215 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 RADILQ96JH8 1075 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 LINC00052Q96N35 136 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 ERMAPQ96PL5 475 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-228ENST00000548938 BRD7Q9NPI1 651 aa12.75□□□□□ -0.37
HDAC7-228ENST00000548938 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
HDAC7-228ENST00000548938 A0A0C4DFX4 3053 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 IGKV1-8A0A0C4DH67 115 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 CDHR4A6H8M9 788 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 GMDSO60547 372 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 PEX14O75381 377 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 OR5F1O95221 314 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 AIFM1O95831 613 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 PRKAR1BP31321 381 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 GDNFP39905 211 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 PRR5P85299 388 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 LTB4RQ15722 352 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 SFRP4Q6FHJ7 346 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-228ENST00000548938 TMEM81Q6P7N7 255 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 ESX1Q8N693 406 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 MRPL43Q8N983 215 aaKnown RBP12.74□□□□□ -0.37
HDAC7-228ENST00000548938 KAT2AQ92830 837 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 C1QTNF2Q9BXJ5 285 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 HCN3Q9P1Z3 774 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 RPS6KB2Q9UBS0 482 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 GPR34Q9UPC5 381 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 MYO10Q9HD67 2058 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 ANTXRLA6NF34 631 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 UNC119BA6NIH7 251 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 BHLHE40O14503 412 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 BET1O15155 118 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 ERI3O43414 337 aaKnown RBP12.74□□□□□ -0.37
HDAC7-228ENST00000548938 HYAL3O43820 417 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-228ENST00000548938 ADRB1P08588 477 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 CLUP10909 449 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 IL9P15248 144 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 NOS3P29474 1203 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 CTNNB1P35222 781 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 VEGFCP49767 419 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 PITPNAQ00169 270 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 ZNF85Q03923 595 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 SLC9A5Q14940 896 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 TMEM255AQ5JRV8 349 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 TCTE1Q5JU00 501 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 AMZ2Q86W34 360 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 CMIPQ8IY22 773 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 OR11G2Q8NGC1 345 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 PFN4Q8NHR9 129 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 GHSRQ92847 366 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 RIT1Q92963 219 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 PTP4A1Q93096 173 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 PPA2Q9H2U2 334 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 C20orf141Q9NUB4 165 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 POMT2Q9UKY4 750 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 WNT6Q9Y6F9 365 aa12.74□□□□□ -0.37
HDAC7-228ENST00000548938 CENPVL1A0A0U1RR11 272 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 hCG_1807616A0A1W2PRN6 198 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 EMC8O43402 210 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 RGS11O94810 467 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 CD53P19397 219 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 MAKP20794 623 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 PYCR1P32322 319 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 GBX2P52951 348 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-228ENST00000548938 OPCMLQ14982 345 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 ARHGAP19Q14CB8 494 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 TRAM1Q15629 374 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 SLC22A10Q63ZE4 541 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 SEZ6L2Q6UXD5 910 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 WDR88Q6ZMY6 472 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 SSX6Q7RTT6 188 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 RFLNBQ8N5W9 214 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 OR52L1Q8NGH7 329 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
HDAC7-228ENST00000548938 C6orf106Q9H6K1 298 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-228ENST00000548938 LIN7BQ9HAP6 207 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 FBXL4Q9UKA2 621 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 SPATA2Q9UM82 520 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 NPFFR2Q9Y5X5 522 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 KCNMB2Q9Y691 235 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 CLEC3AO75596 197 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 ALDOBP05062 364 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 EPXP11678 715 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 TEAD1P28347 426 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 THSD4Q6ZMP0 1018 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 SMIM4Q8WVI0 70 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 LRIG1Q96JA1 1093 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 TEAD3Q99594 435 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 C7orf50Q9BRJ6 194 aaKnown RBP12.73□□□□□ -0.37
HDAC7-228ENST00000548938 FN3KQ9H479 309 aa12.73□□□□□ -0.37
HDAC7-228ENST00000548938 XKR8Q9H6D3 395 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms