RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 METTL4Q8N3J2 472 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 OR9I1Q8NGQ6 314 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 OR1J4Q8NGS1 313 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 OR51Q1Q8NH59 317 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 RAB39BQ96DA2 213 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 THOC3Q96J01 351 aaKnown RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 MMP28Q9H239 520 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CHRDQ9H2X0 955 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 MTHFD2LQ9H903 347 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 RAB9BQ9NP90 201 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 PRDM6Q9NQX0 595 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 PAK1IP1Q9NWT1 392 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 LOXL2Q9Y4K0 774 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 RALGAPA2Q2PPJ7 1873 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 TRPM6Q9BX84 2022 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 LOC105369274A0A096LPK9 316 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 XPNPEP2O43895 674 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CREG1O75629 220 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 DNAJB5O75953 348 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 OR1E2P47887 323 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CTXN1P60606 82 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 RPL19P84098 196 aaKnown RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 FAPQ12884 760 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 IHHQ14623 411 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 OR4N4Q8N0Y3 316 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 TMEM102Q8N9M5 508 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF548Q8NEK5 533 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 OR7G3Q8NG95 312 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 OR2T4Q8NH00 348 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 AURKBQ96GD4 344 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 C12orf57Q99622 126 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 URM1Q9BTM9 101 aaKnown RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 KAT8Q9H7Z6 458 aaKnown RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CNOT11Q9UKZ1 510 aaKnown RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 HMX2A2RU54 273 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 PRSS44E7EML9 344 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CD3GP09693 182 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 PVALBP20472 110 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 PRDX3P30048 256 aaKnown RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 GSK3BP49841 420 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 NKAIN1Q4KMZ8 207 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 CTSL3PQ5NE16 218 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 SLC22A10Q63ZE4 541 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 GLT8D1Q68CQ7 371 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 SLC25A25Q6KCM7 469 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 C1orf210Q8IVY1 113 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 OR1N1Q8NGS0 311 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 SPTSSAQ969W0 71 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF775Q96BV0 537 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 INSM2Q96T92 566 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-218ENST00000545889 MAPKAP1Q9BPZ7 522 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 SEC22CQ9BRL7 303 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 SNTG1Q9NSN8 517 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 ANKRD10Q9NXR5 420 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 DUSP13Q9UII6 198 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 ICKQ9UPZ9 632 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 PTGDR2Q9Y5Y4 395 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 SIP14410 1827 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 MYO16Q9Y6X6 1858 aa8.05□□□□□ -1.12
CLIP1-218ENST00000545889 BLACEA4D250 179 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 C5orf51A6NDU8 294 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 F5H5K5 113 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 H0Y8X5 98 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GREM1O60565 184 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 NDUFV2P19404 249 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 NAA10P41227 235 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 MAP2K4P45985 399 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GCGRP47871 477 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 PRDX1Q06830 199 aaKnown RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 KHDC1LQ5JSQ8 128 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 PAQR7Q86WK9 346 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF808Q8N4W9 903 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GPR150Q8NGU9 434 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 THAP4Q8WY91 577 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 RHBDF1Q96CC6 855 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 LGALS12Q96DT0 336 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 FAM129BQ96TA1 746 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SLC6A16Q9GZN6 736 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 IGSF5Q9NSI5 407 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 COMMD3Q9UBI1 195 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 NDRG3Q9UGV2 375 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 NBASA2RRP1 2371 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 H7C2Y5 167 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 KCNK5O95279 499 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ERP29P30040 261 aaKnown RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 RIDAP52758 137 aaKnown RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 CEBPGP53567 150 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 MLLT10P55197 1068 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 DCAF7P61962 342 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ZP2Q05996 745 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 IL10RAQ13651 578 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SCGB2B2Q4G0G5 96 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 BCL7AQ4VC05 210 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 RPL13AP3Q6NVV1 102 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 C3P1Q6ZMU1 363 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF767PQ75MW2 155 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ZFAND4Q86XD8 727 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 MARCH9Q86YJ5 346 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 LYSMD2Q8IV50 215 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms